Genome ID：GCA_019449765.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	22	33	39.66

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CCFLLOKH_24	2200	3069	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
CCFLLOKH_24	1607	2200	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
CCFLLOKH_24	1607	2200	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CCFLLOKH_35	19421	20680	STER_RS07100	0.0	Capsule	Immune modulation	99.76	100.00	WP_011681445
CCFLLOKH_24	1607	2200	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
CCFLLOKH_18	4599	6257	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
CCFLLOKH_12	20758	21597	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
CCFLLOKH_35	18448	19424	STER_RS07095	0.0	Capsule	Immune modulation	99.39	99.90	WP_011681444
CCFLLOKH_21	85645	86435	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	99.24	100.00	-
CCFLLOKH_35	17462	18430	STER_RS07090	0.0	Capsule	Immune modulation	99.17	100.00	WP_011681443
CCFLLOKH_26	14653	15414	srtA	0.0	Sortase A	Exoenzyme	99.08	100.00	-
CCFLLOKH_21	18940	19671	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
CCFLLOKH_21	8953	10368	STER_RS05250	0.0	Capsule	Immune modulation	98.87	100.00	WP_011681165
CCFLLOKH_21	18940	19671	STU_RS14645	0.0	Capsule	Immune modulation	98.63	100.00	WP_011226048
CCFLLOKH_21	18940	19671	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
CCFLLOKH_35	16745	17460	STER_RS07085	0.0	Capsule	Immune modulation	98.05	99.86	WP_011681442
CCFLLOKH_21	18239	18931	STR_RS05255	0.0	Capsule	Immune modulation	97.83	100.00	WP_011227247
CCFLLOKH_21	18239	18931	STU_RS14640	0.0	Capsule	Immune modulation	97.83	100.00	WP_011226047
CCFLLOKH_21	19672	21132	STER_RS05320	0.0	Capsule	Immune modulation	97.54	100.00	WP_011681177
CCFLLOKH_35	15629	16399	STER_RS07075	0.0	Capsule	Immune modulation	97.15	99.10	WP_011681440
CCFLLOKH_21	17491	18229	STER_RS05305	0.0	Capsule	Immune modulation	97.02	99.73	WP_011681174
CCFLLOKH_21	19672	21132	STU_RS14650	0.0	Capsule	Immune modulation	96.92	100.21	WP_011226049
CCFLLOKH_21	17494	18229	STR_RS05250	0.0	Capsule	Immune modulation	96.47	98.13	WP_011227246
CCFLLOKH_35	20799	21650	rfbD	0.0	Capsule	Immune modulation	96.36	100.00	WP_014621820
CCFLLOKH_21	17491	18229	STU_RS14635	0.0	Capsule	Immune modulation	96.35	99.73	WP_011226046
CCFLLOKH_21	19672	21132	STR_RS05265	0.0	Capsule	Immune modulation	95.96	100.21	WP_041827043
CCFLLOKH_21	16064	17431	STU_RS14630	0.0	Capsule	Immune modulation	94.96	100.00	WP_011226045
CCFLLOKH_21	16066	17431	STER_RS05300	0.0	Capsule	Immune modulation	94.36	99.85	WP_011681173
CCFLLOKH_21	18239	18931	STER_RS05310	0.0	Capsule	Immune modulation	90.04	100.00	WP_011681175
CCFLLOKH_4	30764	32067	eno	0.0	Streptococcal enolase	Exoenzyme	88.09	99.54	WP_000022832
CCFLLOKH_42	474	1484	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.86	99.90	WP_002986042
CCFLLOKH_23	3021	4304	tig/ropA	0.0	Trigger factor	Stress survival	80.65	99.77	WP_000107753
CCFLLOKH_24	132	1178	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CCFLLOKH_26	18101	19084	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
CCFLLOKH_7	27708	28781	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
CCFLLOKH_3	53343	54311	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
CCFLLOKH_40	22954	25257	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
CCFLLOKH_28	12181	13662	SPD_0310	0.0	UPF0371 protein SPD_0310	92.11	100.00	ABJ54480
CCFLLOKH_10	8741	10987	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
CCFLLOKH_12	41260	42252	recA	0.0	DNA recombination and repair	91.24	85.31	AAL00560
CCFLLOKH_12	4276	5247	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
CCFLLOKH_37	19750	18599	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
CCFLLOKH_35	34900	32912	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
CCFLLOKH_26	1901	171	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.87	100.00	AAK34199
CCFLLOKH_48	31541	30063	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
CCFLLOKH_4	30764	32065	Eno	0.0	enolase	86.21	99.77	ABP90468
CCFLLOKH_48	16352	14460	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
CCFLLOKH_10	13912	12203	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
CCFLLOKH_43	21652	22662	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
CCFLLOKH_19	1793	432	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
CCFLLOKH_44	15571	13679	PepO	0.0	endopeptidase	80.03	100.00	ABF32980
CCFLLOKH_4	16334	17224	bglB	5.80e-180	putative phospho--glucosidase	88.89	99.66	AAK33487
CCFLLOKH_16	9971	9033	SP_0676	2.90e-169	transcription facot	81.15	97.20	AAK74821
CCFLLOKH_10	11179	12036	metF	4.91e-166	methionine biosynthesis enzymes	86.01	99.31	AAK74739
CCFLLOKH_21	57965	57261	covR	3.08e-132	responder protein	85.53	100.00	AAK71319
CCFLLOKH_26	65740	65069	rr01	1.59e-126	response regulator	84.38	99.56	CAB54566
CCFLLOKH_21	57965	57261	walR	1.30e-122	DNA-binding response regulator	82.13	100.00	ANC99504
CCFLLOKH_55	29793	30479	CovR	2.03e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
CCFLLOKH_10	17869	18537	CiaR	2.15e-119	two-component response regulator	84.31	99.55	AAK74935
CCFLLOKH_10	17869	18540	ciaR	2.11e-117	two component system response regulator	82.14	99.12	AIK75708
CCFLLOKH_12	42564	42959	SpxA2	8.60e-76	transcriptional regulator	90.91	100.00	ERL21461
CCFLLOKH_19	13150	13551	SpxA1	1.28e-67	transcriptional regulator	80.60	100.00	ERL19273
CCFLLOKH_56	13241	13528	spr0479	2.96e-49	essential gene	86.46	98.97	AAK99283
CCFLLOKH_3	18930	19184	spr1327	1.57e-45	essential gene	95.29	100.00	AAL00131
CCFLLOKH_47	15813	16076	spr0175	1.28e-42	pathogenitcity related	84.09	100.00	AAK98979
CCFLLOKH_47	16640	16906	spr0177	2.81e-34	essential gene	84.27	88.12	AAK98981
CCFLLOKH_23	4462	4962	RopE (M5005_Spy_1611)	7.94e-77	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
CCFLLOKH_40	22954	25251	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
CCFLLOKH_44	1167	148	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	95.88	100.00	ABJ55451