Genome ID：GCA_019449885.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	33	41.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JIOHCKLC_16	2218	3087	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
JIOHCKLC_16	1625	2218	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
JIOHCKLC_20	86798	87607	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
JIOHCKLC_16	1625	2218	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
JIOHCKLC_20	87591	88547	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
JIOHCKLC_20	88544	89692	STU_RS16255	0.0	Capsule	Immune modulation	99.74	100.00	WP_041828290
JIOHCKLC_16	1625	2218	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
JIOHCKLC_20	93188	94039	rfbD	0.0	Capsule	Immune modulation	99.65	100.00	WP_014621820
JIOHCKLC_6	25547	27205	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
JIOHCKLC_20	85593	86798	STU_RS16240	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226326
JIOHCKLC_20	82737	84521	STU_RS16230	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226325
JIOHCKLC_20	89801	90811	STU_RS16260	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226330
JIOHCKLC_20	84518	85573	STU_RS16235	0.0	Capsule	Immune modulation	99.34	100.00	WP_002948022
JIOHCKLC_5	657	2072	STER_RS05250	0.0	Capsule	Immune modulation	99.15	100.00	WP_011681165
JIOHCKLC_17	14648	15409	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
JIOHCKLC_1	21037	21876	cbpD	0.0	Autolysin	Exoenzyme	98.69	100.00	WP_011226733
JIOHCKLC_13	19266	20054	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.48	99.75	-
JIOHCKLC_3	111274	112005	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
JIOHCKLC_3	111274	112005	STER_RS05315	0.0	Capsule	Immune modulation	98.09	100.00	WP_011681176
JIOHCKLC_3	111274	112005	STR_RS05260	0.0	Capsule	Immune modulation	97.68	100.00	WP_011227248
JIOHCKLC_20	90814	92085	STU_RS16265	0.0	Capsule	Immune modulation	97.48	99.76	WP_011226331
JIOHCKLC_3	109813	111273	STER_RS05320	0.0	Capsule	Immune modulation	97.06	100.00	WP_011681177
JIOHCKLC_3	112716	113456	STER_RS05305	0.0	Capsule	Immune modulation	97.03	100.00	WP_011681174
JIOHCKLC_3	112716	113456	STU_RS14635	0.0	Capsule	Immune modulation	96.36	100.00	WP_011226046
JIOHCKLC_3	109813	111273	STU_RS14650	0.0	Capsule	Immune modulation	96.30	100.21	WP_011226049
JIOHCKLC_3	109813	111273	STR_RS05265	0.0	Capsule	Immune modulation	96.17	100.21	WP_041827043
JIOHCKLC_3	112716	113451	STR_RS05250	0.0	Capsule	Immune modulation	96.06	98.13	WP_011227246
JIOHCKLC_3	113513	114876	STU_RS14630	0.0	Capsule	Immune modulation	95.53	99.71	WP_011226045
JIOHCKLC_3	112014	112706	STR_RS05255	0.0	Capsule	Immune modulation	95.40	99.86	WP_011227247
JIOHCKLC_3	112014	112706	STU_RS14640	0.0	Capsule	Immune modulation	95.40	99.86	WP_011226047
JIOHCKLC_3	113513	114880	STER_RS05300	0.0	Capsule	Immune modulation	94.52	99.93	WP_011681173
JIOHCKLC_3	112014	112706	STER_RS05310	0.0	Capsule	Immune modulation	89.47	100.00	WP_011681175
JIOHCKLC_35	95745	97048	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
JIOHCKLC_24	312	1322	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.46	99.80	WP_002986042
JIOHCKLC_20	6574	7857	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
JIOHCKLC_16	150	1196	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JIOHCKLC_17	18096	19079	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
JIOHCKLC_3	24961	26034	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
JIOHCKLC_20	259006	261309	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
JIOHCKLC_35	12110	13078	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
JIOHCKLC_18	52059	53540	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
JIOHCKLC_3	53339	55585	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
JIOHCKLC_1	40667	41659	recA	0.0	DNA recombination and repair	91.24	85.31	AAL00560
JIOHCKLC_1	4551	5522	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
JIOHCKLC_20	145313	144162	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
JIOHCKLC_20	109009	107021	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
JIOHCKLC_17	1901	171	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
JIOHCKLC_27	62970	61492	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
JIOHCKLC_35	95745	97046	Eno	0.0	enolase	86.21	99.77	ABP90468
JIOHCKLC_27	47781	45889	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
JIOHCKLC_11	6192	7901	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
JIOHCKLC_26	21558	22568	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
JIOHCKLC_5	66801	68162	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
JIOHCKLC_26	71925	70033	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
JIOHCKLC_35	81309	82199	bglB	4.95e-179	putative phospho--glucosidase	88.55	99.66	AAK33487
JIOHCKLC_7	39729	40664	SP_0676	2.03e-169	transcription facot	81.73	96.89	AAK74821
JIOHCKLC_3	55777	56634	metF	1.07e-165	methionine biosynthesis enzymes	86.36	99.31	AAK74739
JIOHCKLC_3	72958	73662	covR	3.07e-132	responder protein	85.53	100.00	AAK71319
JIOHCKLC_18	33084	32413	rr01	2.12e-125	response regulator	83.93	99.56	CAB54566
JIOHCKLC_3	72958	73662	walR	1.29e-122	DNA-binding response regulator	82.13	100.00	ANC99504
JIOHCKLC_11	2238	1570	CiaR	8.66e-120	two-component response regulator	84.31	99.55	AAK74935
JIOHCKLC_32	73687	74373	CovR	6.72e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
JIOHCKLC_11	2238	1567	ciaR	8.52e-118	two component system response regulator	82.14	99.12	AIK75708
JIOHCKLC_1	41956	42351	SpxA2	8.51e-76	transcriptional regulator	90.91	100.00	ERL21461
JIOHCKLC_5	55438	55037	SpxA1	1.39e-67	transcriptional regulator	80.60	100.00	ERL19273
JIOHCKLC_32	96066	96353	spr0479	9.30e-49	essential gene	86.46	98.97	AAK99283
JIOHCKLC_33	129078	129332	spr1327	1.40e-44	essential gene	94.12	100.00	AAL00131
JIOHCKLC_27	14138	14401	spr0175	3.53e-42	pathogenitcity related	84.09	100.00	AAK98979
JIOHCKLC_27	14965	15231	spr0177	7.71e-34	essential gene	84.27	88.12	AAK98981
JIOHCKLC_20	8015	8515	RopE (M5005_Spy_1611)	7.30e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
JIOHCKLC_20	259006	261303	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
JIOHCKLC_26	57469	56450	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451