Genome ID:GCA_019449915.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 33 | 47.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KKGJEFNB_1 | 20045 | 20884 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| KKGJEFNB_9 | 29809 | 30660 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| KKGJEFNB_7 | 65326 | 66087 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| KKGJEFNB_6 | 34402 | 35325 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| KKGJEFNB_6 | 35285 | 36235 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| KKGJEFNB_6 | 36260 | 37342 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| KKGJEFNB_6 | 37432 | 38406 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| KKGJEFNB_6 | 38412 | 38891 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| KKGJEFNB_6 | 39084 | 40202 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| KKGJEFNB_6 | 41893 | 42492 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| KKGJEFNB_6 | 42629 | 43378 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| KKGJEFNB_6 | 44089 | 44820 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| KKGJEFNB_7 | 29969 | 30562 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| KKGJEFNB_9 | 17331 | 19076 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| KKGJEFNB_9 | 19078 | 20778 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| KKGJEFNB_9 | 21998 | 22804 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| KKGJEFNB_9 | 22804 | 23745 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| KKGJEFNB_9 | 23742 | 24890 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| KKGJEFNB_4 | 74543 | 76201 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| KKGJEFNB_6 | 30221 | 31279 | waaB | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_157822584 |
| KKGJEFNB_6 | 40770 | 41729 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_041827042 |
| KKGJEFNB_6 | 32973 | 34394 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011227236 |
| KKGJEFNB_6 | 43388 | 44080 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011227247 |
| KKGJEFNB_7 | 29969 | 30562 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| KKGJEFNB_9 | 20796 | 21998 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011227428 |
| KKGJEFNB_7 | 29969 | 30562 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| KKGJEFNB_9 | 19078 | 20778 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| KKGJEFNB_9 | 20796 | 21998 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011681436 |
| KKGJEFNB_6 | 43388 | 44080 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.57 | 100.00 | WP_011226047 |
| KKGJEFNB_9 | 21998 | 22804 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| KKGJEFNB_9 | 22804 | 23745 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| KKGJEFNB_6 | 110662 | 111452 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| KKGJEFNB_9 | 23742 | 24890 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| KKGJEFNB_7 | 30562 | 31431 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| KKGJEFNB_6 | 44821 | 46263 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.11 | 99.93 | WP_041827043 |
| KKGJEFNB_6 | 44089 | 44820 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| KKGJEFNB_6 | 42643 | 43378 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| KKGJEFNB_6 | 44089 | 44820 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| KKGJEFNB_9 | 17331 | 19076 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| KKGJEFNB_6 | 42643 | 43378 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| KKGJEFNB_9 | 28429 | 29688 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| KKGJEFNB_6 | 44821 | 46263 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.18 | 99.93 | WP_011226049 |
| KKGJEFNB_6 | 44821 | 46263 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.17 | 99.73 | WP_011681177 |
| KKGJEFNB_6 | 43388 | 44080 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.75 | 100.00 | WP_011681175 |
| KKGJEFNB_25 | 239015 | 240318 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| KKGJEFNB_14 | 197531 | 198541 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| KKGJEFNB_9 | 21998 | 22804 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| KKGJEFNB_21 | 6320 | 7603 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| KKGJEFNB_7 | 28494 | 29540 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| KKGJEFNB_9 | 27734 | 28432 | STER_RS07095 | 5.85e-154 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| KKGJEFNB_6 | 40478 | 40714 | STR_RS05235* | 4.64e-120 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| KKGJEFNB_9 | 26914 | 27380 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| KKGJEFNB_9 | 21261 | 21998 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.09 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KKGJEFNB_7 | 68774 | 69757 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| KKGJEFNB_2 | 40942 | 42015 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| KKGJEFNB_25 | 156780 | 157748 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| KKGJEFNB_10 | 155193 | 157496 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| KKGJEFNB_2 | 61466 | 63712 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| KKGJEFNB_8 | 25718 | 27199 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.90 | 100.00 | ABJ54480 |
| KKGJEFNB_1 | 39676 | 40668 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| KKGJEFNB_1 | 3563 | 4534 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| KKGJEFNB_10 | 41362 | 40211 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| KKGJEFNB_10 | 6889 | 4907 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| KKGJEFNB_7 | 52580 | 50850 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| KKGJEFNB_14 | 169075 | 167597 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| KKGJEFNB_25 | 239015 | 240316 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| KKGJEFNB_14 | 154339 | 152447 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| KKGJEFNB_2 | 66637 | 64928 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| KKGJEFNB_14 | 21202 | 22212 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| KKGJEFNB_5 | 7460 | 6099 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| KKGJEFNB_14 | 71533 | 69641 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| KKGJEFNB_25 | 224585 | 225475 | bglB | 4.51e-179 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| KKGJEFNB_4 | 13510 | 12575 | SP_0676 | 3.69e-169 | transcription facot | 81.73 | 96.89 | AAK74821 |
| KKGJEFNB_2 | 63904 | 64761 | metF | 3.37e-166 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| KKGJEFNB_6 | 82963 | 82259 | covR | 2.37e-131 | responder protein | 84.68 | 100.00 | AAK71319 |
| KKGJEFNB_7 | 121957 | 121286 | rr01 | 1.97e-126 | response regulator | 84.38 | 99.56 | CAB54566 |
| KKGJEFNB_6 | 82963 | 82259 | walR | 1.70e-121 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| KKGJEFNB_23 | 66035 | 66721 | CovR | 4.11e-119 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| KKGJEFNB_2 | 70590 | 71240 | CiaR | 5.41e-118 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| KKGJEFNB_2 | 70590 | 71240 | ciaR | 2.78e-115 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| KKGJEFNB_1 | 40965 | 41360 | SpxA2 | 8.28e-76 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| KKGJEFNB_5 | 18818 | 19219 | SpxA1 | 1.06e-67 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| KKGJEFNB_24 | 13452 | 13739 | spr0479 | 3.36e-49 | essential gene | 86.46 | 98.97 | AAK99283 |
| KKGJEFNB_25 | 122106 | 122360 | spr1327 | 4.28e-45 | essential gene | 95.29 | 100.00 | AAL00131 |
| KKGJEFNB_14 | 120695 | 120958 | spr0175 | 1.50e-41 | pathogenitcity related | 82.95 | 100.00 | AAK98979 |
| KKGJEFNB_14 | 121522 | 121788 | spr0177 | 2.62e-33 | essential gene | 84.27 | 88.12 | AAK98981 |
| KKGJEFNB_21 | 7761 | 8261 | RopE (M5005_Spy_1611) | 4.44e-76 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| KKGJEFNB_10 | 155193 | 157490 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| KKGJEFNB_14 | 57072 | 56053 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |