Genome ID:GCA_019450095.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 35 | 33 | 48.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IEHOACBJ_15 | 54813 | 55682 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| IEHOACBJ_14 | 1026 | 2441 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681165 |
| IEHOACBJ_14 | 3642 | 4622 | STER_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681166 |
| IEHOACBJ_14 | 4615 | 5799 | STER_RS05265 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681167 |
| IEHOACBJ_14 | 5816 | 6868 | STER_RS05270 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681168 |
| IEHOACBJ_14 | 6883 | 7791 | STER_RS05275 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681169 |
| IEHOACBJ_14 | 7812 | 8873 | STER_RS05280 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_202964935 |
| IEHOACBJ_14 | 8910 | 9401 | STER_RS05285 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681171 |
| IEHOACBJ_14 | 9413 | 9889 | STER_RS05290 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681172 |
| IEHOACBJ_14 | 12069 | 12809 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681174 |
| IEHOACBJ_14 | 12819 | 13511 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681175 |
| IEHOACBJ_14 | 13520 | 14251 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681176 |
| IEHOACBJ_14 | 14252 | 15712 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681177 |
| IEHOACBJ_15 | 54220 | 54813 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| IEHOACBJ_16 | 84438 | 86183 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681434 |
| IEHOACBJ_16 | 86185 | 87885 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827753 |
| IEHOACBJ_16 | 87903 | 89105 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681436 |
| IEHOACBJ_16 | 89105 | 89911 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681437 |
| IEHOACBJ_16 | 89911 | 90852 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681438 |
| IEHOACBJ_16 | 90849 | 91997 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681439 |
| IEHOACBJ_16 | 92116 | 92892 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681440 |
| IEHOACBJ_16 | 93238 | 93954 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681442 |
| IEHOACBJ_16 | 93955 | 94923 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681443 |
| IEHOACBJ_16 | 94941 | 95918 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681444 |
| IEHOACBJ_16 | 95915 | 97174 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681445 |
| IEHOACBJ_14 | 10645 | 12012 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 99.85 | 100.00 | WP_011681173 |
| IEHOACBJ_15 | 54220 | 54813 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| IEHOACBJ_16 | 86185 | 87885 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827077 |
| IEHOACBJ_15 | 54220 | 54813 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| IEHOACBJ_13 | 71540 | 73198 | fbp54 | 0.0 | FBPs | Adherence | 99.64 | 100.00 | WP_011227179 |
| IEHOACBJ_12 | 19769 | 20608 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| IEHOACBJ_16 | 89105 | 89911 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011227429 |
| IEHOACBJ_16 | 89911 | 90852 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011227430 |
| IEHOACBJ_16 | 87903 | 89105 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011227428 |
| IEHOACBJ_16 | 90849 | 91997 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011227431 |
| IEHOACBJ_14 | 88844 | 89634 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.74 | 100.00 | - |
| IEHOACBJ_14 | 12074 | 12809 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 98.50 | 98.13 | WP_011227246 |
| IEHOACBJ_14 | 12069 | 12809 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 98.25 | 100.00 | WP_011226046 |
| IEHOACBJ_14 | 13520 | 14251 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227248 |
| IEHOACBJ_16 | 84438 | 86183 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227426 |
| IEHOACBJ_14 | 13520 | 14251 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.09 | 100.00 | WP_011226048 |
| IEHOACBJ_15 | 89583 | 90344 | srtA | 0.0 | Sortase A | Exoenzyme | 97.64 | 100.00 | - |
| IEHOACBJ_14 | 14252 | 15712 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.47 | 100.21 | WP_011226049 |
| IEHOACBJ_14 | 14252 | 15712 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.92 | 100.21 | WP_041827043 |
| IEHOACBJ_16 | 97293 | 98144 | rfbD | 0.0 | Capsule | Immune modulation | 96.83 | 100.00 | WP_014621820 |
| IEHOACBJ_14 | 10649 | 12012 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 94.94 | 99.71 | WP_011226045 |
| IEHOACBJ_14 | 12819 | 13511 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011226047 |
| IEHOACBJ_14 | 12819 | 13511 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011227247 |
| IEHOACBJ_7 | 46532 | 47835 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| IEHOACBJ_19 | 64485 | 65495 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.54 | 99.41 | WP_002986042 |
| IEHOACBJ_16 | 89105 | 89911 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| IEHOACBJ_31 | 5482 | 6765 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| IEHOACBJ_15 | 52745 | 53791 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| IEHOACBJ_16 | 88368 | 89105 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 84.96 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IEHOACBJ_15 | 93031 | 94014 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| IEHOACBJ_8 | 27708 | 28781 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| IEHOACBJ_18 | 57600 | 59903 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| IEHOACBJ_6 | 17699 | 18667 | spr0084 | 0.0 | pathogenitcity related | 92.88 | 98.48 | AAK98888 |
| IEHOACBJ_15 | 169787 | 171268 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.51 | 100.00 | ABJ54480 |
| IEHOACBJ_8 | 59618 | 61864 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| IEHOACBJ_12 | 39400 | 40398 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| IEHOACBJ_12 | 3285 | 4256 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| IEHOACBJ_16 | 146348 | 145197 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| IEHOACBJ_16 | 111183 | 109195 | uvrB | 0.0 | excinuclease ABC, B subunit | 89.14 | 100.00 | AE014259_2 |
| IEHOACBJ_15 | 76831 | 75101 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| IEHOACBJ_22 | 47331 | 45853 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| IEHOACBJ_7 | 46532 | 47833 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| IEHOACBJ_22 | 32596 | 30704 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.74 | 98.90 | ABP91129 |
| IEHOACBJ_8 | 64789 | 63080 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| IEHOACBJ_20 | 23095 | 24105 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| IEHOACBJ_13 | 97633 | 96272 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| IEHOACBJ_21 | 10876 | 8984 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| IEHOACBJ_7 | 32096 | 32986 | bglB | 3.48e-179 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| IEHOACBJ_13 | 17994 | 17056 | SP_0676 | 7.20e-169 | transcription facot | 81.47 | 97.20 | AAK74821 |
| IEHOACBJ_8 | 62056 | 62913 | metF | 5.83e-166 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| IEHOACBJ_14 | 52535 | 51831 | covR | 2.15e-132 | responder protein | 85.53 | 100.00 | AAK71319 |
| IEHOACBJ_15 | 145180 | 144509 | rr01 | 2.96e-125 | response regulator | 83.93 | 99.56 | CAB54566 |
| IEHOACBJ_14 | 52535 | 51831 | walR | 9.04e-123 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| IEHOACBJ_8 | 68744 | 69412 | CiaR | 7.72e-119 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| IEHOACBJ_31 | 158441 | 159127 | CovR | 9.01e-119 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| IEHOACBJ_8 | 68744 | 69415 | ciaR | 7.60e-117 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| IEHOACBJ_12 | 40674 | 41048 | SpxA2 | 2.56e-71 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| IEHOACBJ_13 | 108996 | 109397 | SpxA1 | 3.31e-67 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| IEHOACBJ_32 | 16726 | 17013 | spr0479 | 3.23e-49 | essential gene | 86.46 | 98.97 | AAK99283 |
| IEHOACBJ_3 | 33747 | 34001 | spr1327 | 4.18e-45 | essential gene | 94.12 | 100.00 | AAL00131 |
| IEHOACBJ_21 | 64718 | 64981 | spr0175 | 2.54e-42 | pathogenitcity related | 84.09 | 100.00 | AAK98979 |
| IEHOACBJ_21 | 65545 | 65811 | spr0177 | 5.56e-34 | essential gene | 84.27 | 88.12 | AAK98981 |
| IEHOACBJ_31 | 6923 | 7423 | RopE (M5005_Spy_1611) | 4.41e-76 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| IEHOACBJ_18 | 57600 | 59897 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| IEHOACBJ_20 | 58956 | 57937 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |