Genome ID:GCA_019464335.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBMIDLLD_1 | 3435432 | 3435749 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| BBMIDLLD_1 | 3435094 | 3435432 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| BBMIDLLD_1 | 2944154 | 2946724 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| BBMIDLLD_1 | 2602723 | 2604369 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| BBMIDLLD_1 | 2349485 | 2350078 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| BBMIDLLD_1 | 2299011 | 2300444 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| BBMIDLLD_1 | 2286197 | 2287117 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| BBMIDLLD_1 | 418985 | 419839 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| BBMIDLLD_1 | 401892 | 403094 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| BBMIDLLD_1 | 181166 | 182335 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BBMIDLLD_1 | 418985 | 419839 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| BBMIDLLD_1 | 1949420 | 1950796 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.33 | 100.00 | D12567 |
| BBMIDLLD_1 | 2286197 | 2287117 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBMIDLLD_1 | 2602726 | 2604369 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| BBMIDLLD_1 | 418988 | 419839 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| BBMIDLLD_1 | 1949423 | 1950796 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.47 | 100.00 | WP_063856081.1 |
| BBMIDLLD_1 | 2286197 | 2287114 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| BBMIDLLD_1 | 1946931 | 1947449 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.33 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BBMIDLLD_1 | 4141373 | 4142014 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| BBMIDLLD_1 | 1453184 | 1454365 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| BBMIDLLD_1 | 1013839 | 1014624 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| BBMIDLLD_1 | 1012617 | 1013813 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| BBMIDLLD_1 | 3981736 | 3983499 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| BBMIDLLD_1 | 1451559 | 1452701 | capA | 0.0 | Capsule | Immune modulation | 98.69 | 100.00 | NP_391469 |
| BBMIDLLD_1 | 1452720 | 1453169 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| BBMIDLLD_1 | 1010003 | 1010941 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.40 | 100.00 | NP_391077 |
| BBMIDLLD_1 | 1002847 | 1009983 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.38 | 100.00 | NP_391076 |
| BBMIDLLD_1 | 1010969 | 1012588 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBMIDLLD_1 | 2110173 | 2111309 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| BBMIDLLD_1 | 1996358 | 1997227 | pdxS | 3.10e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BBMIDLLD_1 | 3744204 | 3744980 | CodY | 3.39e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BBMIDLLD_1 | 1294562 | 1295131 | ClpP | 2.51e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |