Genome ID:GCA_019593595.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2022.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HMKDLONG_171539417319tet(M)ARO:3000186tet(M)98.13100.31AB039845.1
HMKDLONG_171380815184tet(L)ARO:3000179tet(L)99.13100.00M11036.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HMKDLONG_171380815184tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.78100.00M29725
HMKDLONG_171539417319tet(M)Doxycycline, Tetracycline, Minocycline99.12100.00X75073

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HMKDLONG_171381115184tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.34100.00WP_001574277.1
HMKDLONG_171539717319tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX98.91100.00WP_000691736.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HMKDLONG_92818827481WalR2.18e-116transcriptional regulatory protein85.59100.43EPH95667
HMKDLONG_29703596838CspR3.87e-28cold shock protein81.82100.00AAO82613
HMKDLONG_29703596841CspA1.89e-27cold shock protein81.5498.48CAA62903