Genome ID:GCA_019704355.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 14 | 10 | 3 | 17.46 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POFEPANA_1 | 3539392 | 3540042 | Streptococcus suis chloramphenicol acetyltransferase | ARO:3004455 | Ssui_ACT_CHL | 94.91 | 100.00 | AB080798.1 |
| POFEPANA_1 | 2714849 | 2715703 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| POFEPANA_1 | 2696140 | 2697342 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| POFEPANA_1 | 2473822 | 2474991 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| POFEPANA_1 | 1355993 | 1356307 | ykkD | ARO:3003064 | ykkD | 99.05 | 99.05 | AL009126.1 |
| POFEPANA_1 | 1355655 | 1355993 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| POFEPANA_1 | 895850 | 898420 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| POFEPANA_1 | 583811 | 585454 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| POFEPANA_1 | 338743 | 339336 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| POFEPANA_1 | 288240 | 289673 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| POFEPANA_1 | 275425 | 276345 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| POFEPANA_1 | 2714849 | 2715703 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| POFEPANA_1 | 3539392 | 3540042 | cat(pC194) | Chloramphenicol | 100.00 | 100.00 | NC_002013 |
| POFEPANA_1 | 275425 | 276345 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| POFEPANA_1 | 4178713 | 4180089 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POFEPANA_1 | 2714852 | 2715703 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| POFEPANA_1 | 3539392 | 3540039 | catA | type A-9 chloramphenicol O-acetyltransferase | EXACTX | 100.00 | 100.00 | WP_001010387.1 |
| POFEPANA_1 | 275425 | 276342 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| POFEPANA_1 | 4176195 | 4176713 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| POFEPANA_1 | 4178716 | 4180089 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| POFEPANA_1 | 583814 | 585454 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| POFEPANA_1 | 2030505 | 2033099 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| POFEPANA_1 | 1983847 | 1985610 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| POFEPANA_1 | 3270723 | 3271508 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| POFEPANA_1 | 3266887 | 3267825 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| POFEPANA_1 | 3269501 | 3270697 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| POFEPANA_1 | 3267853 | 3269472 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| POFEPANA_1 | 3259731 | 3266867 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| POFEPANA_1 | 2274470 | 2275111 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| POFEPANA_1 | 3679626 | 3680807 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| POFEPANA_1 | 3678001 | 3679143 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| POFEPANA_1 | 3679162 | 3679611 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| POFEPANA_1 | 132473 | 133609 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| POFEPANA_1 | 18665 | 19534 | pdxS | 3.12e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| POFEPANA_1 | 3525447 | 3526016 | ClpP | 2.53e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |