Genome ID:GCA_019704455.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IDLFBEEJ_1 | 2707895 | 2708749 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| IDLFBEEJ_1 | 2689186 | 2690388 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| IDLFBEEJ_1 | 2466869 | 2468038 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IDLFBEEJ_1 | 1349040 | 1349354 | ykkD | ARO:3003064 | ykkD | 99.05 | 99.05 | AL009126.1 |
| IDLFBEEJ_1 | 1348702 | 1349040 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IDLFBEEJ_1 | 888401 | 890971 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| IDLFBEEJ_1 | 577933 | 579579 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| IDLFBEEJ_1 | 332865 | 333458 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| IDLFBEEJ_1 | 285034 | 286467 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| IDLFBEEJ_1 | 272219 | 273139 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| IDLFBEEJ_1 | 206313 | 207074 | ANT(4')-Ia | ARO:3002623 | ANT(4')-Ia | 99.60 | 100.00 | K02551.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IDLFBEEJ_1 | 206313 | 207074 | aadD | Amikacin, Tobramycin | 100.00 | 100.00 | M19465 |
| IDLFBEEJ_1 | 2707895 | 2708749 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| IDLFBEEJ_1 | 272219 | 273139 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IDLFBEEJ_1 | 206316 | 207083 | aadD1 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ia | EXACTX | 100.00 | 100.00 | WP_001795128.1 |
| IDLFBEEJ_1 | 2707898 | 2708749 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| IDLFBEEJ_1 | 272219 | 273127 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| IDLFBEEJ_1 | 577936 | 579579 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| IDLFBEEJ_1 | 4162605 | 4163123 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| IDLFBEEJ_1 | 2023552 | 2026146 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IDLFBEEJ_1 | 1976894 | 1978657 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| IDLFBEEJ_1 | 2267517 | 2268158 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| IDLFBEEJ_1 | 3671617 | 3672798 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| IDLFBEEJ_1 | 3263718 | 3264503 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| IDLFBEEJ_1 | 3669992 | 3671134 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| IDLFBEEJ_1 | 3252726 | 3259862 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.30 | 100.00 | NP_391076 |
| IDLFBEEJ_1 | 3259882 | 3260820 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.04 | 100.00 | NP_391077 |
| IDLFBEEJ_1 | 3262496 | 3263692 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| IDLFBEEJ_1 | 3671153 | 3671602 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| IDLFBEEJ_1 | 3260848 | 3262467 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IDLFBEEJ_1 | 132474 | 133610 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IDLFBEEJ_1 | 18665 | 19534 | pdxS | 3.12e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IDLFBEEJ_1 | 1662338 | 1663114 | CodY | 3.40e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IDLFBEEJ_1 | 3518422 | 3518991 | ClpP | 2.52e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |