Genome ID：GCA_019704475.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
14	10	4	17.66

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LDPDIDCE_1	2861688	2863064	tet(L)	ARO:3000179	tet(L)	99.78	100.00	M11036.1
LDPDIDCE_1	2707458	2708312	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
LDPDIDCE_1	2688749	2689951	blt	ARO:3003006	blt	100.00	100.00	L32599.1
LDPDIDCE_1	2466432	2467601	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LDPDIDCE_1	1348598	1348912	ykkD	ARO:3003064	ykkD	99.05	99.05	AL009126.1
LDPDIDCE_1	1348260	1348598	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LDPDIDCE_1	885370	887940	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
LDPDIDCE_1	574722	576368	vmlR	ARO:3004476	vmlR	98.36	100.18	NC_000964.3
LDPDIDCE_1	326843	327436	tmrB	ARO:3003059	tmrB	99.49	100.00	AL009126.3
LDPDIDCE_1	279012	280445	lmrB	ARO:3002813	lmrB	99.79	100.00	JYFL01000006.1
LDPDIDCE_1	266197	267117	mphK	ARO:3004541	mphK	98.68	100.00	CP010314.1
LDPDIDCE_1	200291	201052	ANT(4')-Ia	ARO:3002623	ANT(4')-Ia	99.60	100.00	K02551.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LDPDIDCE_1	200291	201052	aadD	Amikacin, Tobramycin	100.00	100.00	M19465
LDPDIDCE_1	2707458	2708312	aadK	Streptomycin	100.00	100.00	M26879
LDPDIDCE_1	2861688	2863064	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	M29725
LDPDIDCE_1	266197	267117	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LDPDIDCE_1	200294	201061	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	EXACTX	100.00	100.00	WP_001795128.1
LDPDIDCE_1	2707461	2708312	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
LDPDIDCE_1	2861691	2863064	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_001574277.1
LDPDIDCE_1	266197	267105	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.68	99.02	WP_003246254.1
LDPDIDCE_1	574725	576368	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.36	100.00	WP_003234144.1
LDPDIDCE_1	4185372	4185890	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.75	100.00	WP_003242546.1
LDPDIDCE_1	2023115	2025709	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LDPDIDCE_1	1976457	1978220	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
LDPDIDCE_1	2267080	2267721	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
LDPDIDCE_1	3694483	3695664	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LDPDIDCE_1	3264925	3265710	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
LDPDIDCE_1	3692858	3694000	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
LDPDIDCE_1	3253933	3261069	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.30	100.00	NP_391076
LDPDIDCE_1	3261089	3262027	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.04	100.00	NP_391077
LDPDIDCE_1	3263703	3264899	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.00	100.00	NP_391079
LDPDIDCE_1	3694019	3694468	capC	0.0	Capsule	Immune modulation	98.89	100.00	NP_391470
LDPDIDCE_1	3262055	3263674	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	96.73	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LDPDIDCE_1	126618	127754	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LDPDIDCE_1	18665	19534	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LDPDIDCE_1	1661896	1662672	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
LDPDIDCE_1	3541288	3541857	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595