Genome ID:GCA_019748555.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 8 | 18.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDPLPHJJ_23 | 596403 | 596741 | ykkC | ARO:3003063 | ykkC | 97.32 | 100.00 | AL009126.1 |
| BDPLPHJJ_23 | 596086 | 596403 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| BDPLPHJJ_27 | 468079 | 469281 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| BDPLPHJJ_27 | 438837 | 439691 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| BDPLPHJJ_12 | 252978 | 255548 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| BDPLPHJJ_25 | 170241 | 171410 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| BDPLPHJJ_29 | 110139 | 111059 | mphK | ARO:3004541 | mphK | 96.08 | 100.00 | CP010314.1 |
| BDPLPHJJ_29 | 96810 | 98249 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| BDPLPHJJ_1 | 70941 | 72587 | vmlR | ARO:3004476 | vmlR | 99.27 | 100.18 | NC_000964.3 |
| BDPLPHJJ_29 | 47141 | 47734 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BDPLPHJJ_26 | 17348 | 18724 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.77 | 100.00 | X08034 |
| BDPLPHJJ_27 | 438837 | 439691 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
| BDPLPHJJ_29 | 110139 | 111059 | mph(K) | Spiramycin, Telithromycin | 96.53 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDPLPHJJ_1 | 70944 | 72587 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.27 | 100.00 | WP_003234144.1 |
| BDPLPHJJ_26 | 17348 | 18718 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 99.78 | WP_003242953.1 |
| BDPLPHJJ_27 | 438837 | 439688 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| BDPLPHJJ_29 | 110142 | 111059 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 96.08 | 100.00 | WP_003246254.1 |
| BDPLPHJJ_26 | 20748 | 21266 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| BDPLPHJJ_25 | 476206 | 478803 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.17 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BDPLPHJJ_28 | 171910 | 173091 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| BDPLPHJJ_28 | 581035 | 581820 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| BDPLPHJJ_25 | 370346 | 370986 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 99.84 | NP_390062 |
| BDPLPHJJ_28 | 173106 | 173555 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| BDPLPHJJ_28 | 173574 | 174716 | capA | 0.0 | Capsule | Immune modulation | 99.12 | 100.00 | NP_391469 |
| BDPLPHJJ_28 | 581846 | 583042 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| BDPLPHJJ_28 | 585676 | 592812 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.80 | 100.00 | NP_391076 |
| BDPLPHJJ_25 | 527577 | 529340 | dep/capD | 0.0 | Capsule | Immune modulation | 98.64 | 100.00 | NP_389723 |
| BDPLPHJJ_28 | 583071 | 584690 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
| BDPLPHJJ_28 | 584718 | 585656 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BDPLPHJJ_3 | 27955 | 26819 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| BDPLPHJJ_2 | 11233 | 10364 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BDPLPHJJ_23 | 284666 | 283890 | CodY | 8.29e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BDPLPHJJ_28 | 329289 | 328720 | ClpP | 4.18e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| BDPLPHJJ_23 | 746943 | 746551 | spxA1 | 6.52e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| BDPLPHJJ_23 | 746943 | 746551 | spx | 3.89e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| BDPLPHJJ_4 | 34661 | 34419 | SpoVG | 7.49e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| BDPLPHJJ_1 | 17250 | 17447 | CspA | 4.38e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| BDPLPHJJ_25 | 358381 | 358187 | CspD | 3.31e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |