Genome ID:GCA_019802645.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBPAHEMI_2 | 55915 | 56652 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| BBPAHEMI_25 | 862 | 1824 | CfxA3 | ARO:3003003 | CfxA3 | 99.38 | 99.69 | AF472622.2 |
| BBPAHEMI_37 | 1 | 1239 | tet(Q) | ARO:3000191 | tet(Q) | 97.58 | 62.86 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BBPAHEMI_2 | 55915 | 56652 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | U18931 |
| BBPAHEMI_25 | 862 | 1824 | cfxA3 | Ampicillin | 99.59 | 99.69 | AF472622 |
| BBPAHEMI_25 | 862 | 1824 | cfxA4 | Unknown Beta-lactam | 99.59 | 99.69 | AY769933 |
| BBPAHEMI_25 | 862 | 1824 | cfxA5 | Unknown Beta-lactam | 99.59 | 99.69 | AY769934 |
| BBPAHEMI_37 | 1 | 1191 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.66 | 61.84 | X58717 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBPAHEMI_25 | 862 | 1821 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.38 | 100.00 | WP_004339683.1 |
| BBPAHEMI_2 | 55915 | 56649 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
| BBPAHEMI_37 | 1 | 1191 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 98.24 | 61.93 | WP_004293868.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBPAHEMI_10 | 25987 | 24407 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |