Genome ID:GCA_019880325.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4235.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OHNMDGMF_1512667513713clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OHNMDGMF_1512667513710cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9099.33KR610408
OHNMDGMF_125369812538357tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline87.36100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OHNMDGMF_1512667513710clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
OHNMDGMF_125369872538357tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.0999.78WP_003242953.1
OHNMDGMF_1510398510916satAstreptothricin N-acetyltransferase SatABLASTX82.66100.00WP_003242546.1
OHNMDGMF_117994831802080rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.06100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OHNMDGMF_134779853479166capB0.0CapsuleImmune modulation82.0499.66NP_391471
OHNMDGMF_134775213477970capC1.46e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OHNMDGMF_1133405134541tufA0.0elongation factor Tu86.5495.69AHM69299
OHNMDGMF_11862719496pdxS1.55e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
OHNMDGMF_115983711599147CodY3.27e-124nutrient-responsive regulator81.08100.00ACJ80679