Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 2 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONKPJGDI_56 | 82 | 576 | lnuC | ARO:3002837 | lnuC | 98.17 | 100.00 | AY928180.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ONKPJGDI_56 | 82 | 576 | lnu(C) | Lincomycin | 99.19 | 100.00 | AY928180 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONKPJGDI_56 | 85 | 576 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ONKPJGDI_32 | 6216 | 5509 | WalR | 6.02e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| ONKPJGDI_19 | 8185 | 7988 | CspR | 5.12e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| ONKPJGDI_19 | 8185 | 7991 | CspA | 8.84e-28 | cold shock protein | 80.00 | 98.48 | CAA62903 |