Genome ID:GCA_020091425.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
7017.07

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PGLIAOFN_1663516664430EstTARO:3007459EstT99.0299.35CP094932.1
PGLIAOFN_1662414663214ErmFARO:3000498ErmF97.74100.00M17124.1
PGLIAOFN_1661290662204EstTARO:3007459EstT99.0299.35CP094932.1
PGLIAOFN_1660245661108aadSARO:3004683aadS95.82100.00M72415.1
PGLIAOFN_1658199659113EstTARO:3007459EstT99.0299.35CP094932.1
PGLIAOFN_1648722650647tet(Q)ARO:3000191tet(Q)96.4197.56Z21523.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PGLIAOFN_1662414663214erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.88100.00M62487
PGLIAOFN_1648722650647tet(Q)Doxycycline, Tetracycline, Minocycline99.84100.00L33696
PGLIAOFN_112259021226852cfxA3Ampicillin86.0198.34AF472622
PGLIAOFN_112259021226852cfxA4Unknown Beta-lactam86.0198.34AY769933
PGLIAOFN_112259021226852cfxA5Unknown Beta-lactam86.0198.34AY769934
PGLIAOFN_112259021226852cfxACefoxitin, Ampicillin86.0198.34U38243

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PGLIAOFN_1662417663214erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX99.62100.00WP_063844771.1
PGLIAOFN_1648722650644tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX99.53100.00WP_063856407.1
PGLIAOFN_1658271659110estTmacrolide hydrolase EstTBLASTX98.94100.00WP_185148407.1
PGLIAOFN_1661362662201estTmacrolide hydrolase EstTBLASTX98.94100.00WP_185148407.1
PGLIAOFN_1663588664427estTmacrolide hydrolase EstTBLASTX98.94100.00WP_185148407.1
PGLIAOFN_1660245661105aadSaminoglycoside 6-adenylyltransferase AadSBLASTX95.82100.00WP_003013318.1
PGLIAOFN_112259001226853cfxACfxA family broad-spectrum class A beta-lactamaseBLASTX83.6599.07WP_004339683.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PGLIAOFN_138670893865509GroEL0.0folding of newly synthesized proteins, preventing misfolding and aggregation87.2996.70BAA04222