Genome ID:GCA_020104495.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 4 | 6 | 14.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MHKJOOJG_3 | 733383 | 733721 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MHKJOOJG_3 | 733066 | 733383 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MHKJOOJG_8 | 567804 | 568658 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| MHKJOOJG_8 | 550730 | 551932 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| MHKJOOJG_8 | 319971 | 321140 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| MHKJOOJG_2 | 275267 | 275860 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| MHKJOOJG_6 | 264209 | 266779 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| MHKJOOJG_4 | 28929 | 30575 | vmlR | ARO:3004476 | vmlR | 99.27 | 100.18 | NC_000964.3 |
| MHKJOOJG_2 | 28927 | 30573 | vmlR | ARO:3004476 | vmlR | 99.27 | 100.18 | NC_000964.3 |
| MHKJOOJG_1 | 7928 | 8245 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MHKJOOJG_1 | 7590 | 7928 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MHKJOOJG_8 | 567804 | 568658 | aadK | Streptomycin | 98.71 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MHKJOOJG_2 | 28927 | 30570 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.27 | 100.00 | WP_003234144.1 |
| MHKJOOJG_4 | 28929 | 30572 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.27 | 100.00 | WP_003234144.1 |
| MHKJOOJG_8 | 567807 | 568658 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| MHKJOOJG_4 | 108638 | 109156 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MHKJOOJG_3 | 307377 | 308558 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| MHKJOOJG_8 | 119251 | 119892 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| MHKJOOJG_3 | 306913 | 307362 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| MHKJOOJG_3 | 305752 | 306894 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MHKJOOJG_1 | 319301 | 320077 | CodY | 4.14e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MHKJOOJG_3 | 149250 | 149819 | ClpP | 4.56e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| MHKJOOJG_5 | 127366 | 126974 | spxA1 | 2.58e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| MHKJOOJG_5 | 127366 | 126974 | spx | 1.54e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| MHKJOOJG_4 | 77735 | 77538 | CspA | 6.36e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MHKJOOJG_8 | 131121 | 131315 | CspD | 6.14e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| MHKJOOJG_5 | 372833 | 373027 | CspB | 3.72e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |