Genome ID:GCA_020311615.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IOPMGPNG_125611472562001aadKARO:3002627aadK97.54100.00AL009126.1
IOPMGPNG_125423312543533bltARO:3003006blt100.00100.00L32599.1
IOPMGPNG_123408912342060bmrARO:3003007bmr99.49100.00M33768.1
IOPMGPNG_113476001347917ykkDARO:3003064ykkD99.05100.00AL009126.1
IOPMGPNG_113472621347600ykkCARO:3003063ykkC99.11100.00AL009126.1
IOPMGPNG_1882269884839Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
IOPMGPNG_1586174587817vmlRARO:3004476vmlR98.72100.00NC_000964.3
IOPMGPNG_1332330332923tmrBARO:3003059tmrB97.97100.00AL009126.3
IOPMGPNG_1281780283213lmrBARO:3002813lmrB99.37100.00JYFL01000006.1
IOPMGPNG_1268969269889mphKARO:3004541mphK98.04100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IOPMGPNG_140613624062738tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034
IOPMGPNG_125611492562001aadKStreptomycin98.1299.77M26879
IOPMGPNG_1268969269889mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IOPMGPNG_140613654062738tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
IOPMGPNG_1586177587817vmlRABC-F type ribosomal protection protein VmlRBLASTX98.72100.00WP_003234144.1
IOPMGPNG_1268969269886mphKmacrolide 2'-phosphotransferase MphKBLASTX98.04100.00WP_003246254.1
IOPMGPNG_125611502562001aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
IOPMGPNG_140588464059364satAstreptothricin N-acetyltransferase SatABLASTX92.49100.00WP_003242546.1
IOPMGPNG_120332352035832rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IOPMGPNG_135801823581363capB0.0CapsuleImmune modulation99.83100.00NP_391471
IOPMGPNG_119827921984555dep/capD0.0CapsuleImmune modulation99.55100.00NP_389723
IOPMGPNG_131594143160199dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
IOPMGPNG_131555783156516dhbB0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391077
IOPMGPNG_135797183580167capC0.0CapsuleImmune modulation99.33100.00NP_391470
IOPMGPNG_131581923159388dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
IOPMGPNG_121412892141930hlyIII0.0Hemolysin IIIExotoxin99.06100.00NP_390062
IOPMGPNG_131484223155558dhbF0.0BacillibactinNutritional/Metabolic factor98.82100.00NP_391076
IOPMGPNG_135785573579699capA0.0CapsuleImmune modulation98.78100.00NP_391469
IOPMGPNG_131565443158163dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IOPMGPNG_1132400133536tufA0.0elongation factor Tu84.9695.69AHM69299
IOPMGPNG_11866519534pdxS3.04e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
IOPMGPNG_116580741658850CodY3.32e-124nutrient-responsive regulator81.08100.00ACJ80679
IOPMGPNG_134138213414390ClpP2.46e-98part of proteolytic complex81.0597.44BAB94595