Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFGOIOME_11 | 126160 | 127125 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
| PFGOIOME_55 | 125409 | 127334 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| PFGOIOME_3 | 105259 | 107184 | tet(Q) | ARO:3000191 | tet(Q) | 90.48 | 97.56 | Z21523.1 |
| PFGOIOME_3 | 103377 | 104513 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| PFGOIOME_3 | 102364 | 103164 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PFGOIOME_3 | 48535 | 49401 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| PFGOIOME_11 | 126160 | 127125 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
| PFGOIOME_3 | 102364 | 103164 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| PFGOIOME_3 | 103377 | 104543 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| PFGOIOME_55 | 125409 | 127334 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFGOIOME_3 | 48538 | 49401 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| PFGOIOME_11 | 126160 | 127122 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
| PFGOIOME_3 | 102364 | 103161 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| PFGOIOME_3 | 103380 | 104543 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| PFGOIOME_55 | 125409 | 127331 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| PFGOIOME_3 | 105262 | 107184 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 91.42 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||