Genome ID：GCA_020404345.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
1	23	34	41.06

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
DFLKOHOO_1	76254	78173	tet(M)	ARO:3000186	tet(M)	99.37	100.00	AB039845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
DFLKOHOO_1	76254	78173	tet(M)	Doxycycline, Tetracycline, Minocycline	99.90	100.00	X75073

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
DFLKOHOO_1	76254	78170	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	EXACTX	100.00	100.00	WP_000691727.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
DFLKOHOO_20	51220	52585	STER_RS05300	0.0	Capsule	Immune modulation	95.24	99.85	WP_011681173
DFLKOHOO_1	244018	244869	rfbD	0.0	Capsule	Immune modulation	94.95	100.00	WP_014621820
DFLKOHOO_20	51220	52587	STU_RS14630	0.0	Capsule	Immune modulation	94.30	100.00	WP_011226045
DFLKOHOO_20	47520	48980	STU_RS14650	0.0	Capsule	Immune modulation	94.05	100.14	WP_011226049
DFLKOHOO_20	50423	51163	STER_RS05305	0.0	Capsule	Immune modulation	93.93	100.00	WP_011681174
DFLKOHOO_20	47520	48980	STER_RS05320	0.0	Capsule	Immune modulation	93.91	100.00	WP_011681177
DFLKOHOO_1	241646	242917	STU_RS16265	0.0	Capsule	Immune modulation	93.63	99.76	WP_011226331
DFLKOHOO_20	50423	51163	STU_RS14635	0.0	Capsule	Immune modulation	93.25	100.00	WP_011226046
DFLKOHOO_20	47520	48980	STR_RS05265	0.0	Capsule	Immune modulation	93.16	100.14	WP_041827043
DFLKOHOO_1	240685	241643	STU_RS16260	0.0	Capsule	Immune modulation	92.81	94.86	WP_011226330
DFLKOHOO_1	232037	233821	STU_RS16230	0.0	Capsule	Immune modulation	92.77	100.00	WP_011226325
DFLKOHOO_20	50423	51158	STR_RS05250	0.0	Capsule	Immune modulation	92.66	98.13	WP_011227246
DFLKOHOO_20	48981	49712	STU_RS14645	0.0	Capsule	Immune modulation	92.62	100.00	WP_011226048
DFLKOHOO_20	48981	49712	STER_RS05315	0.0	Capsule	Immune modulation	92.49	100.00	WP_011681176
DFLKOHOO_1	236870	237826	STU_RS16250	0.0	Capsule	Immune modulation	92.48	100.00	WP_011226328
DFLKOHOO_1	236077	236886	STU_RS16245	0.0	Capsule	Immune modulation	92.36	99.88	WP_002948020
DFLKOHOO_1	234872	236077	STU_RS16240	0.0	Capsule	Immune modulation	91.87	100.00	WP_011226326
DFLKOHOO_20	48981	49712	STR_RS05260	0.0	Capsule	Immune modulation	91.67	100.00	WP_011227248
DFLKOHOO_1	233818	234852	STU_RS16235	0.0	Capsule	Immune modulation	91.48	99.15	WP_002948022
DFLKOHOO_1	237823	238971	STU_RS16255	0.0	Capsule	Immune modulation	91.39	99.91	WP_041828290
DFLKOHOO_23	120081	120950	rfbA	0.0	Capsule	Immune modulation	91.26	100.00	WP_011681286
DFLKOHOO_23	119488	120081	STR_RS05880	0.0	Capsule	Immune modulation	90.91	100.00	WP_011226149
DFLKOHOO_23	119488	120081	STER_RS06030	0.0	Capsule	Immune modulation	90.74	100.00	WP_011226149
DFLKOHOO_23	119488	120081	STU_RS15260	0.0	Capsule	Immune modulation	90.74	100.00	WP_011226149
DFLKOHOO_20	170376	172034	fbp54	0.0	FBPs	Adherence	90.48	99.94	WP_011227179
DFLKOHOO_2	14226	15236	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.65	99.80	WP_002986042
DFLKOHOO_22	167506	168809	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
DFLKOHOO_20	49721	50413	STR_RS05255	0.0	Capsule	Immune modulation	88.18	99.86	WP_011227247
DFLKOHOO_20	49721	50413	STU_RS14640	0.0	Capsule	Immune modulation	88.18	99.86	WP_011226047
DFLKOHOO_24	95161	96066	cbpD	0.0	Autolysin	Exoenzyme	87.86	93.50	WP_082302295
DFLKOHOO_20	49721	50413	STER_RS05310	0.0	Capsule	Immune modulation	87.61	99.86	WP_011681175
DFLKOHOO_8	100679	101440	srtA	0.0	Sortase A	Exoenzyme	84.53	99.87	-
DFLKOHOO_23	118241	119287	rfbB	0.0	Capsule	Immune modulation	80.99	100.00	WP_009659423
DFLKOHOO_18	1744	3027	tig/ropA	0.0	Trigger factor	Stress survival	80.84	99.61	WP_000107753

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
DFLKOHOO_8	104129	105103	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.31	99.09	AAK75326
DFLKOHOO_8	92541	91468	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
DFLKOHOO_1	415093	417399	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
DFLKOHOO_8	241749	243230	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
DFLKOHOO_25	56293	57261	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
DFLKOHOO_8	73483	71237	metE	0.0	methionine biosynthesis enzymes	92.12	100.00	AAK74738
DFLKOHOO_4	37753	36782	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
DFLKOHOO_8	160529	153966	PrtA	0.0	serine protease	90.05	101.96	ABJ55268
DFLKOHOO_22	1741	11	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
DFLKOHOO_1	285684	284533	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
DFLKOHOO_1	257332	255344	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
DFLKOHOO_21	25711	27189	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
DFLKOHOO_22	168809	167508	Eno	0.0	enolase	86.44	99.77	ABP90468
DFLKOHOO_21	41077	42969	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
DFLKOHOO_8	68318	70027	PGM	0.0	phosphoglucomutase	85.11	99.65	ACH87041
DFLKOHOO_4	1874	783	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
DFLKOHOO_21	181797	180787	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
DFLKOHOO_20	141839	143200	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
DFLKOHOO_22	183225	182335	bglB	1.17e-177	putative phospho--glucosidase	87.54	99.66	AAK33487
DFLKOHOO_8	29050	30000	SP_0676	4.15e-170	transcription facot	81.39	98.45	AAK74821
DFLKOHOO_8	71050	70193	metF	6.57e-169	methionine biosynthesis enzymes	87.76	99.31	AAK74739
DFLKOHOO_20	1770	2474	covR	9.48e-127	responder protein	85.53	100.00	AAK71319
DFLKOHOO_8	179151	178480	rr01	1.82e-126	response regulator	84.38	99.56	CAB54566
DFLKOHOO_8	64350	63679	ciaR	1.20e-124	two component system response regulator	85.71	99.12	AIK75708
DFLKOHOO_8	64350	63682	CiaR	2.26e-124	two-component response regulator	87.00	99.55	AAK74935
DFLKOHOO_20	1770	2474	walR	2.15e-120	DNA-binding response regulator	82.13	100.00	ANC99504
DFLKOHOO_18	159427	160113	CovR	4.66e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
DFLKOHOO_4	609	214	SpxA2	4.04e-76	transcriptional regulator	91.67	100.00	ERL21461
DFLKOHOO_20	130368	129967	SpxA1	5.45e-70	transcriptional regulator	82.84	100.00	ERL19273
DFLKOHOO_3	47515	47928	GrpE	4.20e-68	protein grpE	81.88	80.59	ABP89267
DFLKOHOO_18	182639	182926	spr0479	5.32e-48	essential gene	85.42	98.97	AAK99283
DFLKOHOO_25	22539	22793	spr1327	5.24e-45	essential gene	92.94	100.00	AAL00131
DFLKOHOO_21	90158	89895	spr0175	1.09e-42	pathogenitcity related	85.23	100.00	AAK98979
DFLKOHOO_21	89334	89068	spr0177	2.42e-41	essential gene	83.15	88.12	AAK98981
DFLKOHOO_18	3194	3685	RopE (M5005_Spy_1611)	1.03e-72	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
DFLKOHOO_1	415093	417393	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
DFLKOHOO_21	145359	146378	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451