Genome ID:GCA_020509345.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LOHCBLIL_2382900530438lmrBARO:3002813lmrB98.95100.00JYFL01000006.1
LOHCBLIL_32041321582bmrARO:3003007bmr99.49100.00M33768.1
LOHCBLIL_222937111941Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
LOHCBLIL_6840824420ykkCARO:3003063ykkC99.11100.00AL009126.1
LOHCBLIL_6837654082ykkDARO:3003064ykkD98.10100.00AL009126.1
LOHCBLIL_17822303432bltARO:3003006blt100.00100.00L32599.1
LOHCBLIL_24821442998aadKARO:3002627aadK97.54100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LOHCBLIL_2112476626142tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.77100.00D12567
LOHCBLIL_24821462998aadKStreptomycin98.4899.77M26879
LOHCBLIL_19664837402mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LOHCBLIL_2112476926142tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_063856081.1
LOHCBLIL_132829729937vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.81100.00WP_003234144.1
LOHCBLIL_24821472998aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
LOHCBLIL_2112227322791satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LOHCBLIL_293153832476dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
LOHCBLIL_8633074488capB0.0CapsuleImmune modulation99.66100.00NP_391471
LOHCBLIL_8616822824capA0.0CapsuleImmune modulation99.56100.00NP_391469
LOHCBLIL_8628433292capC0.0CapsuleImmune modulation99.56100.00NP_391470
LOHCBLIL_154956410205hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
LOHCBLIL_293536336148dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
LOHCBLIL_1463413035893dep/capD0.0CapsuleImmune modulation99.21100.00NP_389723
LOHCBLIL_292438231518dhbF0.0BacillibactinNutritional/Metabolic factor98.78100.00NP_391076
LOHCBLIL_293414135337dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
LOHCBLIL_293250434123dhbE0.0BacillibactinNutritional/Metabolic factor97.78100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LOHCBLIL_1742797226836tufA0.0elongation factor Tu85.7595.69AHM69299
LOHCBLIL_2291117110302pdxS1.93e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
LOHCBLIL_20437813CodY3.95e-126nutrient-responsive regulator81.08100.00ACJ80679
LOHCBLIL_175443955008ClpP4.22e-100part of proteolytic complex81.0597.44BAB94595
LOHCBLIL_1080198411spxA12.77e-71redox-responsive transcription factor83.97100.00AAF21893
LOHCBLIL_1080198411spx1.65e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
LOHCBLIL_1861445114209SpoVG3.35e-39RNA-binding protein81.4879.41AAT02994
LOHCBLIL_7931383335CspA2.42e-32cold shock protein89.39100.00CAA62903
LOHCBLIL_1542143621630CspD1.95e-29cold shock protein81.5498.48CAC99957
LOHCBLIL_2122127521469CspB2.67e-28cold shock protein83.0898.48CAD00094
LOHCBLIL_7931383332CspR7.59e-28cold shock protein80.0098.48AAO82613