Genome ID:GCA_020535185.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNCMIICA_3 | 24020 | 25945 | tet(M) | ARO:3000186 | tet(M) | 97.35 | 100.31 | AB039845.1 |
| BNCMIICA_3 | 3683 | 4168 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
| BNCMIICA_3 | 1266 | 1913 | catA8 | ARO:3004658 | catA8 | 96.74 | 100.00 | JQ922409.1 |
| BNCMIICA_4 | 1011 | 1496 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BNCMIICA_3 | 26140 | 27292 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.65 | 83.73 | AY081910 |
| BNCMIICA_3 | 1266 | 1913 | cat | Chloramphenicol | 98.77 | 100.00 | U35036 |
| BNCMIICA_3 | 3683 | 4168 | lnu(A) | Lincomycin | 98.77 | 100.00 | M14039 |
| BNCMIICA_3 | 24020 | 25945 | tet(M) | Doxycycline, Tetracycline, Minocycline | 97.98 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNCMIICA_3 | 3686 | 4168 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| BNCMIICA_4 | 1014 | 1496 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| BNCMIICA_3 | 26139 | 27290 | tet(L) | tetracycline efflux MFS transporter Tet(L) | PARTIAL_CONTIG_ENDX | 98.96 | 83.84 | WP_002294500.1 |
| BNCMIICA_3 | 24020 | 25942 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 98.28 | 100.00 | WP_024052575.1 |
| BNCMIICA_3 | 1266 | 1910 | catA | type A-8 chloramphenicol O-acetyltransferase | BLASTX | 97.21 | 100.00 | WP_002352254.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BNCMIICA_1 | 47628 | 48335 | WalR | 3.90e-115 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |