Genome ID:GCA_020552665.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GLNFELJB_1117726761773530aadKARO:3002627aadK98.24100.00AL009126.1
GLNFELJB_1117539321755134bltARO:3003006blt100.00100.00L32599.1
GLNFELJB_1115838571585026bmrARO:3003007bmr99.74100.00M33768.1
GLNFELJB_28436271437914vmlRARO:3004476vmlR98.54100.00NC_000964.3
GLNFELJB_11435154435471ykkDARO:3003064ykkD98.10100.00AL009126.1
GLNFELJB_11434816435154ykkCARO:3003063ykkC100.00100.00AL009126.1
GLNFELJB_29250679253249Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
GLNFELJB_28100415101854lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
GLNFELJB_288760888528mphKARO:3004541mphK98.37100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GLNFELJB_214426745643tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.20100.00D12567
GLNFELJB_288760888528mph(K)Spiramycin, Telithromycin99.13100.00NC_000964
GLNFELJB_1117726781773530aadKStreptomycin98.5999.77M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GLNFELJB_214426745640tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_063856081.1
GLNFELJB_28436274437914vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
GLNFELJB_288760888525mphKmacrolide 2'-phosphotransferase MphKBLASTX98.37100.00WP_003246254.1
GLNFELJB_1117726791773530aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
GLNFELJB_214762048138satAstreptothricin N-acetyltransferase SatABLASTX93.64100.00WP_003242546.1
GLNFELJB_1111547361157333rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.48100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GLNFELJB_1113845351385176hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
GLNFELJB_21961342962280dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
GLNFELJB_21533978535159capB0.0CapsuleImmune modulation99.66100.00NP_391471
GLNFELJB_21962300969436dhbF0.0BacillibactinNutritional/Metabolic factor99.50100.00NP_391076
GLNFELJB_21958470959666dhbC0.0BacillibactinNutritional/Metabolic factor99.42100.00NP_391079
GLNFELJB_21535642536784capA0.0CapsuleImmune modulation99.21100.00NP_391469
GLNFELJB_1111028821104645dep/capD0.0CapsuleImmune modulation99.21100.00NP_389723
GLNFELJB_21535174535623capC0.0CapsuleImmune modulation99.11100.00NP_391470
GLNFELJB_21957659958444dhbA0.0BacillibactinNutritional/Metabolic factor99.11100.00NP_391080
GLNFELJB_21959695961314dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GLNFELJB_303176532901tufA0.0elongation factor Tu84.9695.69AHM69299
GLNFELJB_3243765245pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GLNFELJB_11745152745928CodY1.79e-124nutrient-responsive regulator81.08100.00ACJ80679
GLNFELJB_21693696693127ClpP6.44e-99part of proteolytic complex81.0597.44BAB94595
GLNFELJB_11279535279927spxA11.41e-69redox-responsive transcription factor83.97100.00AAF21893
GLNFELJB_11279535279927spx8.41e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GLNFELJB_313470534463SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
GLNFELJB_28361952362149CspA2.02e-31cold shock protein90.91100.00CAA62903