Genome ID:GCA_020554875.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 0 | 7.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHPNEDDB_76 | 212822 | 213787 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| CHPNEDDB_57 | 33813 | 34547 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| CHPNEDDB_99 | 11643 | 13568 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
| CHPNEDDB_68 | 2342 | 3547 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CHPNEDDB_99 | 11643 | 13568 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| CHPNEDDB_76 | 212822 | 213787 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| CHPNEDDB_76 | 212822 | 213787 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| CHPNEDDB_76 | 212822 | 213787 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| CHPNEDDB_76 | 212822 | 213787 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| CHPNEDDB_57 | 33813 | 34547 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| CHPNEDDB_57 | 31578 | 33041 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.47 | 100.00 | AF274302 |
| CHPNEDDB_57 | 30238 | 31452 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHPNEDDB_76 | 212822 | 213784 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| CHPNEDDB_99 | 11643 | 13565 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| CHPNEDDB_57 | 33813 | 34544 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| CHPNEDDB_68 | 2345 | 3547 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CHPNEDDB_68 | 1808 | 2317 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| CHPNEDDB_57 | 31578 | 33038 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 96.92 | 100.00 | WP_000420313.1 |
| CHPNEDDB_57 | 30238 | 31461 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||