Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 1 | 1 | 7.14 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCEKGKEI_2 | 137432 | 137920 | nimE | ARO:3007107 | nimE | 80.86 | 95.29 | CP036548.1 |
| KCEKGKEI_301 | 17070 | 19043 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| KCEKGKEI_374 | 3678 | 4412 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| KCEKGKEI_331 | 2344 | 3549 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| KCEKGKEI_359 | 113 | 1078 | CfxA2 | ARO:3003002 | CfxA2 | 99.69 | 100.00 | AF118110.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KCEKGKEI_374 | 3678 | 4412 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | M15332 |
| KCEKGKEI_301 | 17118 | 19043 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| KCEKGKEI_359 | 113 | 1078 | cfxA3 | Ampicillin | 99.79 | 100.00 | AF472622 |
| KCEKGKEI_359 | 113 | 1078 | cfxA4 | Unknown Beta-lactam | 99.79 | 100.00 | AY769933 |
| KCEKGKEI_359 | 113 | 1078 | cfxA5 | Unknown Beta-lactam | 99.79 | 100.00 | AY769934 |
| KCEKGKEI_359 | 113 | 1078 | cfxA | Cefoxitin, Ampicillin | 99.79 | 100.00 | U38243 |
| KCEKGKEI_315 | 42616 | 43833 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
| KCEKGKEI_2 | 137432 | 137911 | nimE | Metronidazole | 81.25 | 93.57 | AM042593 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCEKGKEI_331 | 1810 | 2319 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| KCEKGKEI_359 | 113 | 1075 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.69 | 100.00 | WP_004339683.1 |
| KCEKGKEI_374 | 3681 | 4412 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_014387027.1 |
| KCEKGKEI_301 | 17118 | 19040 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KCEKGKEI_331 | 2347 | 3549 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| KCEKGKEI_315 | 42616 | 43836 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
| KCEKGKEI_2 | 137432 | 137917 | nimE | 5-nitroimidazole reductase NimE | BLASTX | 80.86 | 95.29 | WP_005812773.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCEKGKEI_92 | 1 | 213 | virulence_entfm_entls | glsB-Entfm | E. faecium variant Efm_DO | 99.53 | 87.65 | CP003583.1 |
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCEKGKEI_157 | 32324 | 30744 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |