Genome ID：GCA_020562065.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
2	18	34	38.52

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LNACDLGG_34	44409	45872	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302
LNACDLGG_34	43072	44289	mef(A)	Erythromycin, Azithromycin	99.92	100.00	U83667

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LNACDLGG_34	43072	44286	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
LNACDLGG_34	44409	45869	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LNACDLGG_1	183207	184667	STER_RS05320	0.0	Capsule	Immune modulation	97.06	100.00	WP_011681177
LNACDLGG_1	183207	184667	STU_RS14650	0.0	Capsule	Immune modulation	96.72	100.21	WP_011226049
LNACDLGG_68	91422	92137	STER_RS07085	0.0	Capsule	Immune modulation	96.37	99.86	WP_011681442
LNACDLGG_1	183207	184667	STR_RS05265	0.0	Capsule	Immune modulation	96.17	100.21	WP_041827043
LNACDLGG_1	179602	180967	STER_RS05300	0.0	Capsule	Immune modulation	95.24	99.85	WP_011681173
LNACDLGG_68	88147	88998	rfbD	0.0	Capsule	Immune modulation	95.07	100.00	WP_014621820
LNACDLGG_1	179600	180967	STU_RS14630	0.0	Capsule	Immune modulation	94.30	100.00	WP_011226045
LNACDLGG_82	72067	72660	STR_RS05880	0.0	Capsule	Immune modulation	94.11	100.00	WP_011226149
LNACDLGG_82	72067	72660	STER_RS06030	0.0	Capsule	Immune modulation	93.94	100.00	WP_011226149
LNACDLGG_82	72067	72660	STU_RS15260	0.0	Capsule	Immune modulation	93.94	100.00	WP_011226149
LNACDLGG_1	181024	181764	STER_RS05305	0.0	Capsule	Immune modulation	93.79	100.00	WP_011681174
LNACDLGG_1	181024	181764	STU_RS14635	0.0	Capsule	Immune modulation	93.12	100.00	WP_011226046
LNACDLGG_68	92483	93253	STER_RS07075	0.0	Capsule	Immune modulation	93.00	99.10	WP_011681440
LNACDLGG_1	181029	181764	STR_RS05250	0.0	Capsule	Immune modulation	92.53	98.13	WP_011227246
LNACDLGG_68	89117	90375	STER_RS07100	0.0	Capsule	Immune modulation	92.22	99.92	WP_011681445
LNACDLGG_1	182475	183206	STU_RS14645	0.0	Capsule	Immune modulation	92.08	100.00	WP_011226048
LNACDLGG_1	182475	183206	STER_RS05315	0.0	Capsule	Immune modulation	91.67	100.00	WP_011681176
LNACDLGG_1	65642	67300	fbp54	0.0	FBPs	Adherence	91.20	99.94	WP_011227179
LNACDLGG_1	182475	183206	STR_RS05260	0.0	Capsule	Immune modulation	91.12	100.00	WP_011227248
LNACDLGG_82	72660	73529	rfbA	0.0	Capsule	Immune modulation	90.92	100.00	WP_011681286
LNACDLGG_1	181774	182466	STR_RS05255	0.0	Capsule	Immune modulation	88.92	99.71	WP_011227247
LNACDLGG_1	181774	182466	STU_RS14640	0.0	Capsule	Immune modulation	88.92	99.71	WP_011226047
LNACDLGG_83	14267	15277	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.45	99.80	WP_002986042
LNACDLGG_61	19023	19862	cbpD	0.0	Autolysin	Exoenzyme	88.35	99.88	WP_011226733
LNACDLGG_34	22231	23534	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
LNACDLGG_1	181774	182466	STER_RS05310	0.0	Capsule	Immune modulation	87.05	99.71	WP_011681175
LNACDLGG_140	68904	69665	srtA	0.0	Sortase A	Exoenzyme	83.90	99.74	-
LNACDLGG_82	70749	71795	rfbB	0.0	Capsule	Immune modulation	81.51	99.90	WP_009659423
LNACDLGG_93	2480	3763	tig/ropA	0.0	Trigger factor	Stress survival	80.92	99.61	WP_000107753

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LNACDLGG_140	60773	59700	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
LNACDLGG_140	72354	73328	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.00	99.09	AAK75326
LNACDLGG_115	87728	85422	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.54	99.22	AAK74619
LNACDLGG_104	84679	83198	SPD_0310	0.0	UPF0371 protein SPD_0310	92.92	100.00	ABJ54480
LNACDLGG_81	12177	13145	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
LNACDLGG_140	41714	39468	metE	0.0	methionine biosynthesis enzymes	92.12	100.00	AAK74738
LNACDLGG_92	6674	462	PrtA	0.0	serine protease	91.51	96.55	ABJ55268
LNACDLGG_61	4321	5292	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.36	100.00	ABF36968
LNACDLGG_82	104429	102699	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.78	100.00	AAK34199
LNACDLGG_68	75740	77728	uvrB	0.0	excinuclease ABC, B subunit	89.59	100.00	AE014259_2
LNACDLGG_68	47334	48485	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
LNACDLGG_25	25854	27332	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
LNACDLGG_34	22231	23532	Eno	0.0	enolase	86.44	99.77	ABP90468
LNACDLGG_25	41198	43090	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.26	98.90	ABP91129
LNACDLGG_140	36546	38255	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
LNACDLGG_61	41840	42931	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
LNACDLGG_17	28548	29558	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
LNACDLGG_1	92523	91162	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
LNACDLGG_34	7822	8712	bglB	3.11e-178	putative phospho--glucosidase	87.54	99.66	AAK33487
LNACDLGG_1	3486	2536	SP_0676	3.21e-170	transcription facot	81.39	98.45	AAK74821
LNACDLGG_140	39278	38421	metF	3.16e-169	methionine biosynthesis enzymes	87.06	99.31	AAK74739
LNACDLGG_75	28311	27607	covR	1.26e-127	responder protein	85.53	100.00	AAK71319
LNACDLGG_74	18728	18057	rr01	2.36e-127	response regulator	84.38	99.56	CAB54566
LNACDLGG_140	31882	31214	CiaR	2.53e-125	two-component response regulator	87.00	99.55	AAK74935
LNACDLGG_140	31882	31211	ciaR	2.51e-124	two component system response regulator	85.27	99.12	AIK75708
LNACDLGG_75	28311	27607	walR	2.87e-121	DNA-binding response regulator	82.13	100.00	ANC99504
LNACDLGG_123	53782	53096	CovR	1.77e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
LNACDLGG_61	43107	43502	SpxA2	4.30e-76	transcriptional regulator	91.67	100.00	ERL21461
LNACDLGG_1	103991	104392	SpxA1	4.14e-70	transcriptional regulator	82.84	100.00	ERL19273
LNACDLGG_87	6266	5853	GrpE	1.24e-68	protein grpE	81.88	80.59	ABP89267
LNACDLGG_123	30575	30288	spr0479	2.02e-48	essential gene	85.42	98.97	AAK99283
LNACDLGG_2	30382	30636	spr1327	2.97e-45	essential gene	92.94	100.00	AAL00131
LNACDLGG_131	19978	19715	spr0175	3.81e-43	pathogenitcity related	85.23	100.00	AAK98979
LNACDLGG_131	19152	18886	spr0177	6.64e-42	essential gene	83.15	88.12	AAK98981
LNACDLGG_93	3930	4421	RopE (M5005_Spy_1611)	6.51e-73	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
LNACDLGG_115	87728	85428	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.22	98.08	MYN69560
LNACDLGG_131	72526	73545	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451