Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPJKADJD_151 | 16277 | 16762 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
| GPJKADJD_151 | 745 | 2670 | tet(M) | ARO:3000186 | tet(M) | 97.82 | 100.31 | AB039845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GPJKADJD_151 | 16277 | 16762 | lnu(A) | Lincomycin | 98.77 | 100.00 | M14039 |
| GPJKADJD_151 | 745 | 2670 | tet(M) | Doxycycline, Tetracycline, Minocycline | 98.70 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPJKADJD_151 | 16277 | 16759 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| GPJKADJD_151 | 748 | 2670 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 98.44 | 100.00 | WP_000691727.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GPJKADJD_251 | 24506 | 24700 | CspA | 2.51e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |