Genome ID：GCA_020844005.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	22	29	36.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CILOOIII_1	1118023	1118892	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
CILOOIII_1	1117430	1118023	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
CILOOIII_1	1342360	1343619	STER_RS07100	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681445
CILOOIII_1	1117430	1118023	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CILOOIII_1	1117430	1118023	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
CILOOIII_1	1341387	1342363	STER_RS07095	0.0	Capsule	Immune modulation	99.59	99.90	WP_011681444
CILOOIII_1	869827	871485	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
CILOOIII_1	43683	44522	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
CILOOIII_1	1340401	1341369	STER_RS07090	0.0	Capsule	Immune modulation	99.28	100.00	WP_011681443
CILOOIII_1	1154216	1154977	srtA	0.0	Sortase A	Exoenzyme	99.21	100.00	-
CILOOIII_1	980183	980914	STU_RS14645	0.0	Capsule	Immune modulation	99.18	100.00	WP_011226048
CILOOIII_1	980183	980914	STR_RS05260	0.0	Capsule	Immune modulation	99.04	100.00	WP_011227248
CILOOIII_1	980183	980914	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
CILOOIII_1	1339684	1340399	STER_RS07085	0.0	Capsule	Immune modulation	98.32	99.86	WP_011681442
CILOOIII_1	1338568	1339338	STER_RS07075	0.0	Capsule	Immune modulation	97.92	99.23	WP_011681440
CILOOIII_1	970214	971629	STER_RS05250	0.0	Capsule	Immune modulation	97.88	100.00	WP_011681165
CILOOIII_1	980915	982375	STER_RS05320	0.0	Capsule	Immune modulation	97.67	100.00	WP_011681177
CILOOIII_1	1059770	1060568	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	97.62	100.88	-
CILOOIII_1	1343738	1344589	rfbD	0.0	Capsule	Immune modulation	97.30	100.00	WP_014621820
CILOOIII_1	979482	980174	STU_RS14640	0.0	Capsule	Immune modulation	97.11	100.00	WP_011226047
CILOOIII_1	979482	980174	STR_RS05255	0.0	Capsule	Immune modulation	96.97	100.00	WP_011227247
CILOOIII_1	980915	982375	STU_RS14650	0.0	Capsule	Immune modulation	96.65	100.21	WP_011226049
CILOOIII_1	980915	982375	STR_RS05265	0.0	Capsule	Immune modulation	95.96	100.21	WP_041827043
CILOOIII_1	977292	978657	STER_RS05300	0.0	Capsule	Immune modulation	95.46	99.85	WP_011681173
CILOOIII_1	977290	978657	STU_RS14630	0.0	Capsule	Immune modulation	94.08	100.00	WP_011226045
CILOOIII_1	978714	979472	STER_RS05305	0.0	Capsule	Immune modulation	93.41	100.94	WP_011681174
CILOOIII_1	978714	979472	STU_RS14635	0.0	Capsule	Immune modulation	93.02	100.94	WP_011226046
CILOOIII_1	978719	979472	STR_RS05250	0.0	Capsule	Immune modulation	92.71	99.07	WP_011227246
CILOOIII_1	979482	980174	STER_RS05310	0.0	Capsule	Immune modulation	90.06	99.86	WP_011681175
CILOOIII_1	616068	617371	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
CILOOIII_1	1630306	1631316	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
CILOOIII_1	1115955	1117001	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
CILOOIII_1	154287	155570	tig/ropA	0.0	Trigger factor	Stress survival	80.58	99.77	WP_000107753

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CILOOIII_1	1157664	1158647	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
CILOOIII_1	720220	721293	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
CILOOIII_1	1507334	1509637	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
CILOOIII_1	532466	533434	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
CILOOIII_1	1226800	1228281	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
CILOOIII_1	752135	754381	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
CILOOIII_1	70336	71328	recA	0.0	DNA recombination and repair	91.24	85.31	AAL00560
CILOOIII_1	27201	28172	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
CILOOIII_1	1393522	1392371	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
CILOOIII_1	1357627	1355639	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
CILOOIII_1	1141466	1139736	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.87	100.00	AAK34199
CILOOIII_1	1826763	1825285	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
CILOOIII_1	616068	617369	Eno	0.0	enolase	86.21	99.77	ABP90468
CILOOIII_1	1811574	1809682	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
CILOOIII_1	757306	755597	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
CILOOIII_1	1671991	1673001	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
CILOOIII_1	899384	898023	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
CILOOIII_1	1724013	1722121	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
CILOOIII_1	601633	602523	bglB	5.21e-178	putative phospho--glucosidase	88.55	99.66	AAK33487
CILOOIII_1	814883	813948	SP_0676	7.33e-168	transcription facot	81.73	96.89	AAK74821
CILOOIII_1	754573	755430	metF	1.52e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
CILOOIII_1	1019195	1018491	covR	4.34e-131	responder protein	85.53	100.00	AAK71319
CILOOIII_1	1207825	1207154	rr01	2.98e-124	response regulator	83.93	99.56	CAB54566
CILOOIII_1	1019195	1018491	walR	1.83e-121	DNA-binding response regulator	82.13	100.00	ANC99504
CILOOIII_1	308718	309404	CovR	1.02e-117	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
CILOOIII_1	761260	761928	CiaR	2.00e-117	two-component response regulator	84.31	99.55	AAK74935
CILOOIII_1	761260	761931	ciaR	1.97e-115	two component system response regulator	82.14	99.12	AIK75708
CILOOIII_1	71625	71999	SpxA2	1.14e-69	transcriptional regulator	91.20	94.70	ERL21461
CILOOIII_1	910748	911149	SpxA1	3.73e-66	transcriptional regulator	80.60	100.00	ERL19273
CILOOIII_1	155728	156228	RopE (M5005_Spy_1611)	4.88e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
CILOOIII_1	1507334	1509631	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
CILOOIII_1	1709539	1708520	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451