Genome ID:GCA_021233235.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 2 | 14.28 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NLLPAPJA_1 | 3481387 | 3482589 | blt | ARO:3003006 | blt | 98.50 | 100.00 | L32599.1 |
| NLLPAPJA_1 | 1319528 | 1320382 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| NLLPAPJA_1 | 1151258 | 1152691 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| NLLPAPJA_1 | 1138447 | 1139367 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| NLLPAPJA_1 | 1053979 | 1055148 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| NLLPAPJA_1 | 682078 | 682671 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| NLLPAPJA_1 | 233027 | 234673 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.18 | NC_000964.3 |
| NLLPAPJA_1 | 93199 | 93537 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| NLLPAPJA_1 | 92882 | 93199 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NLLPAPJA_1 | 1138447 | 1139367 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
| NLLPAPJA_1 | 1319530 | 1320382 | aadK | Streptomycin | 98.59 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NLLPAPJA_1 | 1138447 | 1139364 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| NLLPAPJA_1 | 233030 | 234673 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| NLLPAPJA_1 | 1319531 | 1320382 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| NLLPAPJA_1 | 2346837 | 2347355 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.33 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NLLPAPJA_1 | 2356994 | 2357635 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| NLLPAPJA_1 | 1380604 | 1381389 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| NLLPAPJA_1 | 1462880 | 1463949 | capB | 0.0 | Capsule | Immune modulation | 99.53 | 90.52 | NP_391471 |
| NLLPAPJA_1 | 1384287 | 1385225 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| NLLPAPJA_1 | 1464432 | 1465574 | capA | 0.0 | Capsule | Immune modulation | 99.12 | 100.00 | NP_391469 |
| NLLPAPJA_1 | 2555710 | 2557473 | dep/capD | 0.0 | Capsule | Immune modulation | 99.09 | 100.00 | NP_389723 |
| NLLPAPJA_1 | 1381415 | 1382611 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| NLLPAPJA_1 | 1385245 | 1392381 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.77 | 100.00 | NP_391076 |
| NLLPAPJA_1 | 1463964 | 1464413 | capC | 0.0 | Capsule | Immune modulation | 98.44 | 100.00 | NP_391470 |
| NLLPAPJA_1 | 1382640 | 1384259 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.79 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NLLPAPJA_1 | 3093756 | 3094625 | pdxS | 2.67e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| NLLPAPJA_1 | 3018179 | 3018955 | CodY | 2.91e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |