Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PKCGLPNJ_1 | 316422 | 317387 | CfxA4 | ARO:3003005 | CfxA4 | 99.69 | 100.00 | AY769933.1 |
| PKCGLPNJ_22 | 170240 | 172165 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| PKCGLPNJ_55 | 10188 | 10925 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| PKCGLPNJ_55 | 7385 | 8122 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PKCGLPNJ_1 | 316422 | 317387 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| PKCGLPNJ_22 | 170240 | 172165 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| PKCGLPNJ_55 | 10188 | 10925 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | U18931 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PKCGLPNJ_1 | 316425 | 317387 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | BLASTX | 99.69 | 100.00 | WP_057280848.1 |
| PKCGLPNJ_22 | 170240 | 172162 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| PKCGLPNJ_55 | 10188 | 10922 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
| PKCGLPNJ_55 | 7385 | 8119 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PKCGLPNJ_17 | 7859 | 6279 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |