Genome ID:GCA_021409785.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMNFKPEP_57 | 116217 | 117182 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| IMNFKPEP_167 | 11914 | 13839 | tet(Q) | ARO:3000191 | tet(Q) | 96.26 | 97.56 | Z21523.1 |
| IMNFKPEP_171 | 9925 | 11064 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| IMNFKPEP_171 | 8590 | 9756 | tet(X) | ARO:3000205 | tet(X) | 99.48 | 100.00 | M37699.1 |
| IMNFKPEP_171 | 7551 | 8414 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| IMNFKPEP_203 | 1834 | 2634 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IMNFKPEP_57 | 116217 | 117182 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| IMNFKPEP_57 | 116217 | 117182 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| IMNFKPEP_57 | 116217 | 117182 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| IMNFKPEP_57 | 116217 | 117182 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| IMNFKPEP_203 | 1834 | 2634 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| IMNFKPEP_171 | 8590 | 9756 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| IMNFKPEP_167 | 11914 | 13839 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMNFKPEP_171 | 7554 | 8414 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| IMNFKPEP_57 | 116217 | 117179 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| IMNFKPEP_171 | 8593 | 9756 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| IMNFKPEP_171 | 9928 | 11064 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| IMNFKPEP_203 | 1837 | 2634 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| IMNFKPEP_167 | 11917 | 13839 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.38 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IMNFKPEP_135 | 24146 | 22566 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.45 | 96.70 | BAA04222 |