Genome ID:GCA_021498185.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HNMJCOBO_139030043903924mphKARO:3004541mphK100.00100.00CP010314.1
HNMJCOBO_138896783891111lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
HNMJCOBO_138399963840589tmrBARO:3003059tmrB100.00100.00AL009126.3
HNMJCOBO_135930993594745vmlRARO:3004476vmlR98.91100.18NC_000964.3
HNMJCOBO_132938743296444Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
HNMJCOBO_128395442839882ykkCARO:3003063ykkC100.00100.00AL009126.1
HNMJCOBO_128392272839544ykkDARO:3003064ykkD99.05100.00AL009126.1
HNMJCOBO_117195291720698bmrARO:3003007bmr99.74100.00M33768.1
HNMJCOBO_115165601517762bltARO:3003006blt100.00100.00L32599.1
HNMJCOBO_114982031499057aadKARO:3002627aadK100.00100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HNMJCOBO_114982031499057aadKStreptomycin100.00100.00M26879
HNMJCOBO_139030043903924mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
HNMJCOBO_13456135937tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.40100.00D12567

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HNMJCOBO_114982031499054aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
HNMJCOBO_139030073903924mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
HNMJCOBO_13794338461satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
HNMJCOBO_135930993594742vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
HNMJCOBO_13456135934tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.25100.00WP_063856081.1
HNMJCOBO_121609072163501rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.0399.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HNMJCOBO_1527990528439capC0.0CapsuleImmune modulation100.00100.00NP_391470
HNMJCOBO_122084202210183dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
HNMJCOBO_1947499948284dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
HNMJCOBO_1952140959276dhbF0.0BacillibactinNutritional/Metabolic factor99.99100.00NP_391076
HNMJCOBO_1951182952120dhbB0.0BacillibactinNutritional/Metabolic factor99.89100.00NP_391077
HNMJCOBO_119201801920821hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
HNMJCOBO_1526794527975capB0.0CapsuleImmune modulation99.83100.00NP_391471
HNMJCOBO_1948310949506dhbC0.0BacillibactinNutritional/Metabolic factor99.67100.00NP_391079
HNMJCOBO_1949535951154dhbE0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391078
HNMJCOBO_1528458529600capA0.0CapsuleImmune modulation99.12100.00NP_391469

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HNMJCOBO_140318094030673tufA0.0elongation factor Tu84.9695.69AHM69299
HNMJCOBO_141306974129828pdxS3.07e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
HNMJCOBO_125262802525504CodY3.36e-124nutrient-responsive regulator81.08100.00ACJ80679
HNMJCOBO_1681205680636ClpP2.49e-98part of proteolytic complex81.0597.44BAB94595