Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 1 | 8.06 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCMLDPMP_311 | 48965 | 50101 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| OCMLDPMP_311 | 47926 | 48789 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| OCMLDPMP_46 | 2133 | 2867 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| OCMLDPMP_53 | 113 | 928 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
| OCMLDPMP_33 | 1 | 1629 | tet(Q) | ARO:3000191 | tet(Q) | 97.42 | 82.65 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OCMLDPMP_53 | 113 | 928 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| OCMLDPMP_311 | 48965 | 50131 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
| OCMLDPMP_46 | 2133 | 2867 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| OCMLDPMP_46 | 55 | 1361 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.40 | 89.21 | AF227520 |
| OCMLDPMP_33 | 1 | 1630 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.36 | 84.63 | Z21523 |
| OCMLDPMP_371 | 348 | 1562 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCMLDPMP_311 | 47929 | 48789 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| OCMLDPMP_319 | 6202 | 7107 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| OCMLDPMP_53 | 113 | 925 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| OCMLDPMP_311 | 48968 | 50131 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| OCMLDPMP_46 | 2133 | 2864 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| OCMLDPMP_33 | 1 | 1629 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 97.42 | 84.71 | WP_002560998.1 |
| OCMLDPMP_371 | 339 | 1562 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
| OCMLDPMP_311 | 50303 | 51052 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | PARTIALX | 99.60 | 65.96 | WP_204376222.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OCMLDPMP_135 | 76957 | 75377 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |