Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LHJHHAFO_60 | 7248 | 8213 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| LHJHHAFO_155 | 4444 | 5610 | tet(X) | ARO:3000205 | tet(X) | 99.48 | 100.00 | M37699.1 |
| LHJHHAFO_71 | 319 | 2244 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| LHJHHAFO_164 | 235 | 1059 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LHJHHAFO_164 | 235 | 1059 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| LHJHHAFO_60 | 7248 | 8213 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| LHJHHAFO_60 | 7248 | 8213 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| LHJHHAFO_60 | 7248 | 8213 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| LHJHHAFO_60 | 7248 | 8213 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| LHJHHAFO_155 | 4444 | 5610 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| LHJHHAFO_71 | 319 | 2244 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LHJHHAFO_164 | 238 | 1059 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| LHJHHAFO_60 | 7248 | 8210 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| LHJHHAFO_155 | 4444 | 5607 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| LHJHHAFO_71 | 319 | 2241 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LHJHHAFO_165 | 27642 | 26062 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |