Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DEAPHNHP_29 | 3769 | 5355 | tet(M) | ARO:3000186 | tet(M) | 99.24 | 82.79 | AB039845.1 |
| DEAPHNHP_345 | 1208 | 2008 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
| DEAPHNHP_163 | 695 | 1597 | cepA | ARO:3003559 | cepA | 99.33 | 100.00 | U05883.1 |
| DEAPHNHP_58 | 235 | 2181 | tet(Q) | ARO:3000191 | tet(Q) | 97.81 | 98.63 | Z21523.1 |
| DEAPHNHP_330 | 1 | 1221 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 63.69 | AJ222769.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DEAPHNHP_29 | 3769 | 5355 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.94 | 82.66 | X75073 |
| DEAPHNHP_163 | 695 | 1597 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
| DEAPHNHP_163 | 695 | 1597 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | L13472 |
| DEAPHNHP_345 | 1208 | 2008 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| DEAPHNHP_58 | 235 | 2147 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.75 | 99.33 | L33696 |
| DEAPHNHP_330 | 1 | 1221 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 63.59 | AJ427422 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DEAPHNHP_29 | 3769 | 5355 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | PARTIAL_CONTIG_ENDX | 100.00 | 82.79 | WP_000691727.1 |
| DEAPHNHP_163 | 698 | 1597 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_005795628.1 |
| DEAPHNHP_345 | 1208 | 2005 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| DEAPHNHP_58 | 235 | 2148 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.96 | 99.53 | WP_063856407.1 |
| DEAPHNHP_330 | 1 | 1221 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | PARTIAL_CONTIG_ENDX | 100.00 | 63.69 | WP_002586627.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||