Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 2 | 7 | 7.55 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBEMHNKK_9 | 50514 | 51563 | clbA | ARO:3002814 | clbA | 99.43 | 100.00 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MBEMHNKK_9 | 50528 | 51563 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 89.00 | 98.67 | KR610408 |
| MBEMHNKK_1 | 374849 | 375789 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 85.35 | 68.34 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBEMHNKK_9 | 50517 | 51563 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 99.43 | 100.00 | WP_012116915.1 |
| MBEMHNKK_2 | 173172 | 175766 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.11 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MBEMHNKK_3 | 144296 | 145477 | capB | 0.0 | Capsule | Immune modulation | 82.12 | 99.66 | NP_391471 |
| MBEMHNKK_3 | 143832 | 144281 | capC | 1.89e-114 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MBEMHNKK_10 | 31636 | 32772 | tufA | 0.0 | elongation factor Tu | 86.81 | 95.69 | AHM69299 |
| MBEMHNKK_14 | 4267 | 5136 | pdxS | 1.34e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| MBEMHNKK_2 | 375398 | 374622 | CodY | 8.61e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MBEMHNKK_5 | 83408 | 83016 | spxA1 | 7.29e-70 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| MBEMHNKK_9 | 69079 | 68882 | CspA | 8.34e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MBEMHNKK_5 | 299177 | 299371 | CspB | 6.95e-27 | cold shock protein | 84.61 | 98.48 | CAD00094 |
| MBEMHNKK_9 | 69079 | 68885 | CspR | 1.09e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| MBEMHNKK_4 | 227189 | 228061 | lipA (SAUSA300_0829) | 1.15e-162 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |