Genome ID:GCA_022832445.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 7 | 17.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AOJPONKI_1 | 1351995 | 1353164 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| AOJPONKI_1 | 444824 | 445141 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| AOJPONKI_1 | 444486 | 444824 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| AOJPONKI_3 | 345406 | 346326 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| AOJPONKI_3 | 332073 | 333512 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| AOJPONKI_3 | 282361 | 282954 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| AOJPONKI_5 | 269611 | 272181 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| AOJPONKI_7 | 74814 | 76016 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| AOJPONKI_7 | 58083 | 58937 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| AOJPONKI_3 | 29004 | 30650 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AOJPONKI_7 | 58083 | 58937 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| AOJPONKI_3 | 345406 | 346326 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AOJPONKI_3 | 29004 | 30647 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| AOJPONKI_3 | 345418 | 346326 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| AOJPONKI_7 | 58083 | 58934 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| AOJPONKI_2 | 35865 | 36383 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| AOJPONKI_1 | 1037454 | 1040042 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.25 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AOJPONKI_1 | 1151258 | 1151899 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| AOJPONKI_2 | 926404 | 927189 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| AOJPONKI_2 | 519718 | 520167 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| AOJPONKI_2 | 518522 | 519703 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| AOJPONKI_1 | 984314 | 986077 | dep/capD | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | NP_389723 |
| AOJPONKI_2 | 520186 | 521328 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| AOJPONKI_2 | 930087 | 931025 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| AOJPONKI_2 | 927215 | 928411 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| AOJPONKI_2 | 931045 | 938181 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.99 | 100.00 | NP_391076 |
| AOJPONKI_2 | 928440 | 930059 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.10 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AOJPONKI_8 | 31638 | 32774 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| AOJPONKI_10 | 4325 | 5194 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| AOJPONKI_1 | 762952 | 763728 | CodY | 1.26e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| AOJPONKI_2 | 674666 | 674097 | ClpP | 6.25e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| AOJPONKI_1 | 276867 | 277259 | spxA1 | 9.93e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| AOJPONKI_1 | 276867 | 277259 | spx | 5.92e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| AOJPONKI_9 | 20480 | 20722 | SpoVG | 7.47e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| AOJPONKI_3 | 78797 | 78600 | CspA | 1.90e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |