Genome ID：GCA_023006585.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	32	40.61

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PKNEEJFP_125	1588	2181	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
PKNEEJFP_79	185	1645	STER_RS05320	0.0	Capsule	Immune modulation	99.93	100.00	WP_011681177
PKNEEJFP_125	1588	2181	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
PKNEEJFP_111	186107	186916	STU_RS16245	0.0	Capsule	Immune modulation	99.75	100.00	WP_002948020
PKNEEJFP_125	2181	3050	rfbA	0.0	Capsule	Immune modulation	99.66	100.00	WP_011681286
PKNEEJFP_125	1588	2181	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
PKNEEJFP_104	101428	103086	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
PKNEEJFP_111	185167	186123	STU_RS16250	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226328
PKNEEJFP_111	189205	190989	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
PKNEEJFP_111	186916	188121	STU_RS16240	0.0	Capsule	Immune modulation	99.17	100.00	WP_011226326
PKNEEJFP_111	178129	178980	rfbD	0.0	Capsule	Immune modulation	99.06	100.00	WP_014621820
PKNEEJFP_79	1646	2377	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
PKNEEJFP_42	46571	47539	cbpD	0.0	Autolysin	Exoenzyme	98.86	100.00	WP_082302295
PKNEEJFP_89	24898	25659	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
PKNEEJFP_111	184022	185170	STU_RS16255	0.0	Capsule	Immune modulation	98.78	100.00	WP_041828290
PKNEEJFP_79	1646	2377	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
PKNEEJFP_79	1646	2377	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
PKNEEJFP_56	1350	2143	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.24	100.25	-
PKNEEJFP_79	12394	13809	STER_RS05250	0.0	Capsule	Immune modulation	98.23	100.00	WP_011681165
PKNEEJFP_79	3088	3828	STU_RS14635	0.0	Capsule	Immune modulation	98.11	100.00	WP_011226046
PKNEEJFP_79	3088	3828	STER_RS05305	0.0	Capsule	Immune modulation	97.71	100.00	WP_011681174
PKNEEJFP_79	185	1645	STU_RS14650	0.0	Capsule	Immune modulation	97.40	100.21	WP_011226049
PKNEEJFP_79	3088	3823	STR_RS05250	0.0	Capsule	Immune modulation	97.15	98.13	WP_011227246
PKNEEJFP_79	3885	5252	STU_RS14630	0.0	Capsule	Immune modulation	97.00	100.00	WP_011226045
PKNEEJFP_79	185	1645	STR_RS05265	0.0	Capsule	Immune modulation	96.85	100.21	WP_041827043
PKNEEJFP_79	2386	3078	STR_RS05255	0.0	Capsule	Immune modulation	95.38	100.00	WP_011227247
PKNEEJFP_79	2386	3078	STU_RS14640	0.0	Capsule	Immune modulation	95.38	100.00	WP_011226047
PKNEEJFP_111	188141	189208	STU_RS16235	0.0	Capsule	Immune modulation	95.27	101.14	WP_002948022
PKNEEJFP_79	3885	5250	STER_RS05300	0.0	Capsule	Immune modulation	94.58	99.85	WP_011681173
PKNEEJFP_79	2386	3078	STER_RS05310	0.0	Capsule	Immune modulation	90.48	100.00	WP_011681175
PKNEEJFP_111	180083	181357	STU_RS16265	0.0	Capsule	Immune modulation	89.42	99.92	WP_011226331
PKNEEJFP_13	96006	97309	eno	0.0	Streptococcal enolase	Exoenzyme	88.02	99.46	WP_000022832
PKNEEJFP_21	262	1272	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
PKNEEJFP_10	59470	60753	tig/ropA	0.0	Trigger factor	Stress survival	80.81	99.77	WP_000107753
PKNEEJFP_125	113	1159	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
PKNEEJFP_79	15629	16212	SPD_RS01775	9.71e-154	Capsule	Immune modulation	83.59	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PKNEEJFP_89	22211	21228	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
PKNEEJFP_32	59454	60527	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
PKNEEJFP_111	15572	13269	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
PKNEEJFP_13	12368	13336	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
PKNEEJFP_72	14125	16371	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
PKNEEJFP_91	17269	15788	SPD_0310	0.0	UPF0371 protein SPD_0310	91.70	100.00	ABJ54480
PKNEEJFP_71	39649	40647	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
PKNEEJFP_71	3535	4506	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
PKNEEJFP_111	129589	130740	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.06	99.74	AAL00050
PKNEEJFP_111	164952	166940	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
PKNEEJFP_89	38410	40140	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
PKNEEJFP_41	27387	28865	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
PKNEEJFP_13	96006	97307	Eno	0.0	enolase	86.21	99.77	ABP90468
PKNEEJFP_41	42576	44468	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
PKNEEJFP_72	19296	17587	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
PKNEEJFP_78	18063	19073	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
PKNEEJFP_104	79574	80935	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
PKNEEJFP_78	68407	66515	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
PKNEEJFP_13	81570	82460	bglB	3.36e-179	putative phospho--glucosidase	88.55	99.66	AAK33487
PKNEEJFP_81	33376	34314	SP_0676	5.66e-169	transcription facot	81.15	97.20	AAK74821
PKNEEJFP_72	16563	17420	metF	2.06e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
PKNEEJFP_56	29823	30527	covR	1.57e-132	responder protein	85.53	100.00	AAK71319
PKNEEJFP_118	18231	18902	rr01	7.49e-126	response regulator	83.93	99.56	CAB54566
PKNEEJFP_56	29823	30527	walR	6.60e-123	DNA-binding response regulator	82.13	100.00	ANC99504
PKNEEJFP_29	16855	17541	CovR	1.33e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
PKNEEJFP_72	23250	23918	CiaR	2.73e-119	two-component response regulator	84.31	99.55	AAK74935
PKNEEJFP_72	23250	23921	ciaR	2.69e-117	two component system response regulator	82.14	99.12	AIK75708
PKNEEJFP_71	40923	41297	SpxA2	2.58e-71	transcriptional regulator	91.20	94.70	ERL21461
PKNEEJFP_104	68212	67811	SpxA1	2.35e-67	transcriptional regulator	80.60	100.00	ERL19273
PKNEEJFP_37	25830	25543	spr0479	3.01e-49	essential gene	86.46	98.97	AAK99283
PKNEEJFP_42	5689	5435	spr1327	1.88e-45	essential gene	95.29	100.00	AAL00131
PKNEEJFP_68	20927	20664	spr0175	8.78e-43	pathogenitcity related	84.09	100.00	AAK98979
PKNEEJFP_68	20100	19834	spr0177	1.92e-34	essential gene	84.27	88.12	AAK98981
PKNEEJFP_111	15572	13275	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
PKNEEJFP_78	53947	52928	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451