Genome ID：GCA_023078435.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
COMBCLOF_1	2724812	2725666	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
COMBCLOF_1	2707092	2708294	blt	ARO:3003006	blt	100.00	100.00	L32599.1
COMBCLOF_1	2503663	2504832	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
COMBCLOF_1	1368276	1368593	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
COMBCLOF_1	1367938	1368276	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
COMBCLOF_1	906157	908727	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
COMBCLOF_1	600902	602545	vmlR	ARO:3004476	vmlR	98.54	100.00	NC_000964.3
COMBCLOF_1	352639	353232	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
COMBCLOF_1	302145	303578	lmrB	ARO:3002813	lmrB	99.37	100.00	JYFL01000006.1
COMBCLOF_1	289331	290251	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
COMBCLOF_1	289331	290251	mph(K)	Spiramycin, Telithromycin	99.78	100.00	NC_000964
COMBCLOF_1	4191639	4193015	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	99.42	100.00	D12567
COMBCLOF_1	2724814	2725666	aadK	Streptomycin	98.71	99.77	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
COMBCLOF_1	289331	290248	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
COMBCLOF_1	4191642	4193015	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	99.13	100.00	WP_063856081.1
COMBCLOF_1	600905	602545	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
COMBCLOF_1	2724815	2725666	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
COMBCLOF_1	4189232	4189750	satA	streptothricin N-acetyltransferase SatA	BLASTX	94.22	100.00	WP_003242546.1
COMBCLOF_1	2197941	2200538	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.48	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
COMBCLOF_1	2300947	2301588	hlyIII	0.0	Hemolysin III	Exotoxin	99.84	100.00	NP_390062
COMBCLOF_1	3700491	3701672	capB	0.0	Capsule	Immune modulation	99.83	100.00	NP_391471
COMBCLOF_1	3280828	3281613	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.62	100.00	NP_391080
COMBCLOF_1	3700027	3700476	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
COMBCLOF_1	2146093	2147856	dep/capD	0.0	Capsule	Immune modulation	99.55	100.00	NP_389723
COMBCLOF_1	3276992	3277930	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.47	100.00	NP_391077
COMBCLOF_1	3698866	3700008	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
COMBCLOF_1	3279606	3280802	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.25	100.00	NP_391079
COMBCLOF_1	3269836	3276972	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.22	100.00	NP_391076
COMBCLOF_1	3277958	3279577	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.96	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
COMBCLOF_1	132472	133608	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
COMBCLOF_1	18661	19530	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
COMBCLOF_1	1678824	1679600	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
COMBCLOF_1	3535398	3535967	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595