Genome ID:GCA_023148545.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EFDBCGOD_10678306679475bmrARO:3003007bmr99.74100.00M33768.1
EFDBCGOD_10455954457156bltARO:3003006blt100.00100.00L32599.1
EFDBCGOD_10437593438447aadKARO:3002627aadK100.00100.00AL009126.1
EFDBCGOD_9425652425969ykkDARO:3003064ykkD100.00100.00AL009126.1
EFDBCGOD_9425314425652ykkCARO:3003063ykkC100.00100.00AL009126.1
EFDBCGOD_11280305281225mphKARO:3004541mphK100.00100.00CP010314.1
EFDBCGOD_11266971268410lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
EFDBCGOD_11217314217907tmrBARO:3003059tmrB100.00100.00AL009126.3
EFDBCGOD_144748249125vmlRARO:3004476vmlR100.00100.00NC_000964.3
EFDBCGOD_122754630116Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EFDBCGOD_10437593438447aadKStreptomycin100.00100.00M26879
EFDBCGOD_11280305281225mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
EFDBCGOD_13637837754tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EFDBCGOD_10437593438444aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
EFDBCGOD_11280308281225mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
EFDBCGOD_13975440272satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
EFDBCGOD_13637837751tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
EFDBCGOD_144748549125vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
EFDBCGOD_135631658910rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
EFDBCGOD_1526355527497capA0.0CapsuleImmune modulation100.00100.00NP_391469
EFDBCGOD_1524691525872capB0.0CapsuleImmune modulation100.00100.00NP_391471
EFDBCGOD_1525887526336capC0.0CapsuleImmune modulation100.00100.00NP_391470
EFDBCGOD_13965811421dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
EFDBCGOD_1933047933832dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
EFDBCGOD_1936730937668dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
EFDBCGOD_1933858935054dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
EFDBCGOD_1935083936702dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
EFDBCGOD_1937688944824dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
EFDBCGOD_10878181878822hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EFDBCGOD_152820827072tufA0.0elongation factor Tu84.9695.69AHM69299
EFDBCGOD_243925261pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
EFDBCGOD_9738916739692CodY8.25e-125nutrient-responsive regulator81.08100.00ACJ80679
EFDBCGOD_1679109678540ClpP6.29e-99part of proteolytic complex81.0597.44BAB94595
EFDBCGOD_9276491276883spxA12.45e-69redox-responsive transcription factor83.21100.00AAF21893
EFDBCGOD_162089921141SpoVG7.57e-39RNA-binding protein81.4879.41AAT02994
EFDBCGOD_1420102207CspA3.38e-32cold shock protein90.91100.00CAA62903
EFDBCGOD_10866219866025CspD5.70e-28cold shock protein81.5498.48CAC99957