Genome ID:GCA_023207975.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IHPIBCPB_1 | 1131671 | 1132264 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| IHPIBCPB_1 | 1005354 | 1006814 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011681177 |
| IHPIBCPB_1 | 1131671 | 1132264 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| IHPIBCPB_1 | 1344317 | 1345126 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | WP_002948020 |
| IHPIBCPB_1 | 1132264 | 1133133 | rfbA | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011681286 |
| IHPIBCPB_1 | 1131671 | 1132264 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| IHPIBCPB_1 | 885391 | 887049 | fbp54 | 0.0 | FBPs | Adherence | 99.64 | 100.00 | WP_011227179 |
| IHPIBCPB_1 | 1345110 | 1346066 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226328 |
| IHPIBCPB_1 | 43670 | 44509 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| IHPIBCPB_1 | 1340244 | 1342028 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.44 | 100.00 | WP_011226325 |
| IHPIBCPB_1 | 1343112 | 1344317 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.17 | 100.00 | WP_011226326 |
| IHPIBCPB_1 | 1352253 | 1353104 | rfbD | 0.0 | Capsule | Immune modulation | 99.06 | 100.00 | WP_014621820 |
| IHPIBCPB_1 | 1004622 | 1005353 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.91 | 100.00 | WP_011681176 |
| IHPIBCPB_1 | 1168457 | 1169218 | srtA | 0.0 | Sortase A | Exoenzyme | 98.82 | 100.00 | - |
| IHPIBCPB_1 | 1346063 | 1347211 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | WP_041828290 |
| IHPIBCPB_1 | 1004622 | 1005353 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011227248 |
| IHPIBCPB_1 | 1004622 | 1005353 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011226048 |
| IHPIBCPB_1 | 1072696 | 1073489 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.24 | 100.25 | - |
| IHPIBCPB_1 | 993190 | 994605 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.23 | 100.00 | WP_011681165 |
| IHPIBCPB_1 | 1003171 | 1003911 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.98 | 100.00 | WP_011226046 |
| IHPIBCPB_1 | 1003171 | 1003911 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.57 | 100.00 | WP_011681174 |
| IHPIBCPB_1 | 1005354 | 1006814 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.40 | 100.21 | WP_011226049 |
| IHPIBCPB_1 | 1003176 | 1003911 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.01 | 98.13 | WP_011227246 |
| IHPIBCPB_1 | 1001747 | 1003114 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 97.00 | 100.00 | WP_011226045 |
| IHPIBCPB_1 | 1005354 | 1006814 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.85 | 100.21 | WP_041827043 |
| IHPIBCPB_1 | 1003921 | 1004613 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.38 | 100.00 | WP_011227247 |
| IHPIBCPB_1 | 1003921 | 1004613 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.38 | 100.00 | WP_011226047 |
| IHPIBCPB_1 | 1342025 | 1343092 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 95.27 | 101.14 | WP_002948022 |
| IHPIBCPB_1 | 1001749 | 1003114 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.58 | 99.85 | WP_011681173 |
| IHPIBCPB_1 | 1003921 | 1004613 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 90.48 | 100.00 | WP_011681175 |
| IHPIBCPB_1 | 1349876 | 1351150 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 89.42 | 99.92 | WP_011226331 |
| IHPIBCPB_1 | 604685 | 605988 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.02 | 99.46 | WP_000022832 |
| IHPIBCPB_1 | 1638641 | 1639651 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.54 | 99.41 | WP_002986042 |
| IHPIBCPB_1 | 145707 | 146990 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.81 | 99.77 | WP_000107753 |
| IHPIBCPB_1 | 1130196 | 1131242 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| IHPIBCPB_1 | 990787 | 991370 | SPD_RS01775 | 1.09e-151 | Capsule | Immune modulation | 83.59 | 96.20 | WP_001819836 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IHPIBCPB_1 | 1171905 | 1172888 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| IHPIBCPB_1 | 723956 | 725029 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| IHPIBCPB_1 | 1515661 | 1517964 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| IHPIBCPB_1 | 521047 | 522015 | spr0084 | 0.0 | pathogenitcity related | 92.57 | 98.48 | AAK98888 |
| IHPIBCPB_1 | 752276 | 754522 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| IHPIBCPB_1 | 1242217 | 1243698 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.70 | 100.00 | ABJ54480 |
| IHPIBCPB_1 | 63301 | 64299 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| IHPIBCPB_1 | 27187 | 28158 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| IHPIBCPB_1 | 1401644 | 1400493 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| IHPIBCPB_1 | 1366281 | 1364293 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| IHPIBCPB_1 | 1155706 | 1153976 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| IHPIBCPB_1 | 1845681 | 1844203 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| IHPIBCPB_1 | 604685 | 605986 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| IHPIBCPB_1 | 1830492 | 1828600 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| IHPIBCPB_1 | 757447 | 755738 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| IHPIBCPB_1 | 1682039 | 1683049 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| IHPIBCPB_1 | 910224 | 908863 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.02 | 99.56 | ABP90420 |
| IHPIBCPB_1 | 1732383 | 1730491 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| IHPIBCPB_1 | 590249 | 591139 | bglB | 5.26e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| IHPIBCPB_1 | 830294 | 829356 | SP_0676 | 2.36e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| IHPIBCPB_1 | 754714 | 755571 | metF | 1.53e-164 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| IHPIBCPB_1 | 1045016 | 1044312 | covR | 4.39e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| IHPIBCPB_1 | 1223242 | 1222571 | rr01 | 8.31e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| IHPIBCPB_1 | 1045016 | 1044312 | walR | 1.85e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| IHPIBCPB_1 | 298737 | 299423 | CovR | 1.01e-117 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| IHPIBCPB_1 | 761401 | 762069 | CiaR | 2.02e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| IHPIBCPB_1 | 761401 | 762072 | ciaR | 1.99e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| IHPIBCPB_1 | 64575 | 64949 | SpxA2 | 1.16e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| IHPIBCPB_1 | 921586 | 921987 | SpxA1 | 1.48e-65 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| IHPIBCPB_1 | 147148 | 147648 | RopE (M5005_Spy_1611) | 4.93e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| IHPIBCPB_1 | 1515661 | 1517958 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| IHPIBCPB_1 | 1717923 | 1716904 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |