Genome ID:GCA_023278025.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DFKCLBBC_1 | 1122323 | 1123192 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| DFKCLBBC_1 | 1121730 | 1122323 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| DFKCLBBC_1 | 1339231 | 1340040 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| DFKCLBBC_1 | 1121730 | 1122323 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| DFKCLBBC_1 | 1340024 | 1340980 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_011226328 |
| DFKCLBBC_1 | 1340977 | 1342125 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.74 | 100.00 | WP_041828290 |
| DFKCLBBC_1 | 1121730 | 1122323 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| DFKCLBBC_1 | 1345621 | 1346472 | rfbD | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_014621820 |
| DFKCLBBC_1 | 913818 | 915476 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| DFKCLBBC_1 | 1338026 | 1339231 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226326 |
| DFKCLBBC_1 | 1335170 | 1336954 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226325 |
| DFKCLBBC_1 | 1342234 | 1343244 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226330 |
| DFKCLBBC_1 | 1336951 | 1338006 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.34 | 100.00 | WP_002948022 |
| DFKCLBBC_1 | 819778 | 821193 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 99.08 | 100.00 | WP_011681165 |
| DFKCLBBC_1 | 1158513 | 1159274 | srtA | 0.0 | Sortase A | Exoenzyme | 98.82 | 100.00 | - |
| DFKCLBBC_1 | 43734 | 44573 | cbpD | 0.0 | Autolysin | Exoenzyme | 98.69 | 100.00 | WP_011226733 |
| DFKCLBBC_1 | 1062657 | 1063445 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.48 | 99.75 | - |
| DFKCLBBC_1 | 794872 | 795603 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011226048 |
| DFKCLBBC_1 | 794872 | 795603 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.09 | 100.00 | WP_011681176 |
| DFKCLBBC_1 | 794872 | 795603 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 97.68 | 100.00 | WP_011227248 |
| DFKCLBBC_1 | 1343247 | 1344518 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.48 | 99.76 | WP_011226331 |
| DFKCLBBC_1 | 793411 | 794871 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.06 | 100.00 | WP_011681177 |
| DFKCLBBC_1 | 796314 | 797054 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.03 | 100.00 | WP_011681174 |
| DFKCLBBC_1 | 796314 | 797054 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 96.36 | 100.00 | WP_011226046 |
| DFKCLBBC_1 | 793411 | 794871 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 96.30 | 100.21 | WP_011226049 |
| DFKCLBBC_1 | 793411 | 794871 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.17 | 100.21 | WP_041827043 |
| DFKCLBBC_1 | 796314 | 797049 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 96.06 | 98.13 | WP_011227246 |
| DFKCLBBC_1 | 797111 | 798474 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 95.53 | 99.71 | WP_011226045 |
| DFKCLBBC_1 | 795612 | 796304 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.25 | 99.86 | WP_011227247 |
| DFKCLBBC_1 | 795612 | 796304 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.25 | 99.86 | WP_011226047 |
| DFKCLBBC_1 | 797111 | 798478 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.52 | 99.93 | WP_011681173 |
| DFKCLBBC_1 | 795612 | 796304 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.32 | 100.00 | WP_011681175 |
| DFKCLBBC_1 | 600976 | 602279 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| DFKCLBBC_1 | 1633455 | 1634465 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.36 | 99.80 | WP_002986042 |
| DFKCLBBC_1 | 142298 | 143581 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| DFKCLBBC_1 | 1120255 | 1121301 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DFKCLBBC_1 | 1161961 | 1162944 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| DFKCLBBC_1 | 708559 | 709632 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| DFKCLBBC_1 | 1511439 | 1513742 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| DFKCLBBC_1 | 517341 | 518309 | spr0084 | 0.0 | pathogenitcity related | 92.57 | 98.48 | AAK98888 |
| DFKCLBBC_1 | 1236622 | 1238103 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.31 | 100.00 | ABJ54480 |
| DFKCLBBC_1 | 736937 | 739183 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| DFKCLBBC_1 | 63364 | 64356 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| DFKCLBBC_1 | 27248 | 28219 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| DFKCLBBC_1 | 1397746 | 1396595 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| DFKCLBBC_1 | 1361442 | 1359454 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| DFKCLBBC_1 | 1145766 | 1144036 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| DFKCLBBC_1 | 1837483 | 1836005 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| DFKCLBBC_1 | 600976 | 602277 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| DFKCLBBC_1 | 1822294 | 1820402 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| DFKCLBBC_1 | 1039023 | 1040732 | PGM | 0.0 | phosphoglucomutase | 84.06 | 99.65 | ACH87041 |
| DFKCLBBC_1 | 1676746 | 1677756 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| DFKCLBBC_1 | 885922 | 887283 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| DFKCLBBC_1 | 1727113 | 1725221 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| DFKCLBBC_1 | 586540 | 587430 | bglB | 5.24e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| DFKCLBBC_1 | 969281 | 970216 | SP_0676 | 7.37e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| DFKCLBBC_1 | 739375 | 740232 | metF | 1.53e-164 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| DFKCLBBC_1 | 756556 | 757260 | covR | 4.37e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| DFKCLBBC_1 | 1217647 | 1216976 | rr01 | 3.00e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| DFKCLBBC_1 | 756556 | 757260 | walR | 1.84e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| DFKCLBBC_1 | 297978 | 298664 | CovR | 1.02e-117 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| DFKCLBBC_1 | 1035069 | 1034401 | CiaR | 2.02e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| DFKCLBBC_1 | 1035069 | 1034398 | ciaR | 1.98e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| DFKCLBBC_1 | 64653 | 65048 | SpxA2 | 3.69e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| DFKCLBBC_1 | 874559 | 874158 | SpxA1 | 3.75e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| DFKCLBBC_1 | 143739 | 144239 | RopE (M5005_Spy_1611) | 4.91e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| DFKCLBBC_1 | 1511439 | 1513736 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| DFKCLBBC_1 | 1712657 | 1711638 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |