Genome ID:GCA_023278425.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3245.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IGODAKOP_1533799534848clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IGODAKOP_1533799534834cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.6198.67KR610408
IGODAKOP_125476842549060tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.8799.93X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IGODAKOP_1533799534845clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
IGODAKOP_125476902549060tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.3199.78WP_003242953.1
IGODAKOP_125492732549791satAstreptothricin N-acetyltransferase SatABLASTX80.35100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IGODAKOP_134423473443528capB0.0CapsuleImmune modulation82.2199.66NP_391471
IGODAKOP_134418833442332capC1.46e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IGODAKOP_1133409134545tufA0.0elongation factor Tu86.8195.69AHM69299
IGODAKOP_11861919488pdxS3.28e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
IGODAKOP_116149821615758CodY4.65e-124nutrient-responsive regulator81.08100.00ACJ80679
IGODAKOP_130653883064516lipA (SAUSA300_0829)1.26e-161lipoic acid synthetase80.8295.41ABD22039