Genome ID：GCA_023520855.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HPHIIJEP_1	3748365	3749534	bmr	ARO:3003007	bmr	99.23	100.00	M33768.1
HPHIIJEP_1	3574034	3575236	blt	ARO:3003006	blt	99.25	100.00	L32599.1
HPHIIJEP_1	3555820	3556674	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
HPHIIJEP_1	1794923	1795840	mphK	ARO:3004541	mphK	98.04	99.67	CP010314.1
HPHIIJEP_1	1781598	1783031	lmrB	ARO:3002813	lmrB	99.58	100.00	JYFL01000006.1
HPHIIJEP_1	1731937	1732530	tmrB	ARO:3003059	tmrB	96.95	100.00	AL009126.3
HPHIIJEP_1	1476952	1478598	vmlR	ARO:3004476	vmlR	99.09	100.18	NC_000964.3
HPHIIJEP_1	1172807	1175377	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3
HPHIIJEP_1	718104	718442	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HPHIIJEP_1	717787	718104	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HPHIIJEP_1	3555820	3556674	aadK	Streptomycin	98.83	100.00	M26879
HPHIIJEP_1	1794923	1795840	mph(K)	Spiramycin, Telithromycin	97.72	99.67	NC_000964
HPHIIJEP_1	2095499	2096875	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	96.37	100.00	D12567

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HPHIIJEP_1	1476952	1478595	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	99.09	100.00	WP_003234144.1
HPHIIJEP_1	3555820	3556671	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
HPHIIJEP_1	1794926	1795840	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.04	100.00	WP_003246254.1
HPHIIJEP_1	2095499	2096872	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	97.16	100.00	WP_063856081.1
HPHIIJEP_1	2098842	2099360	satA	streptothricin N-acetyltransferase SatA	BLASTX	92.49	100.00	WP_003242546.1
HPHIIJEP_1	4037404	4040001	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.76	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HPHIIJEP_1	2587288	2588469	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
HPHIIJEP_1	3946219	3946860	hlyIII	0.0	Hemolysin III	Exotoxin	99.69	100.00	NP_390062
HPHIIJEP_1	3009562	3010347	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
HPHIIJEP_1	506	2269	dep/capD	0.0	Capsule	Immune modulation	99.21	100.00	NP_389723
HPHIIJEP_1	3010373	3011569	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.91	100.00	NP_391079
HPHIIJEP_1	2588484	2588933	capC	0.0	Capsule	Immune modulation	98.89	100.00	NP_391470
HPHIIJEP_1	2588952	2590094	capA	0.0	Capsule	Immune modulation	98.78	100.00	NP_391469
HPHIIJEP_1	3014203	3021339	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.75	100.00	NP_391076
HPHIIJEP_1	3013245	3014183	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.51	100.00	NP_391077
HPHIIJEP_1	3011598	3013217	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.53	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HPHIIJEP_1	1934324	1933188	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HPHIIJEP_1	2048139	2047270	pdxS	3.57e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HPHIIJEP_1	375162	374386	CodY	3.31e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
HPHIIJEP_1	2749645	2749076	ClpP	2.46e-98	part of proteolytic complex	81.05	97.44	BAB94595