Genome ID:GCA_023612315.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEHKOANC_1 | 2786700 | 2787554 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| MEHKOANC_1 | 2767531 | 2768733 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| MEHKOANC_1 | 2539755 | 2540924 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| MEHKOANC_1 | 1333064 | 1333381 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MEHKOANC_1 | 1332726 | 1333064 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MEHKOANC_1 | 869647 | 872217 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| MEHKOANC_1 | 578337 | 579983 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.18 | NC_000964.3 |
| MEHKOANC_1 | 337299 | 337892 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| MEHKOANC_1 | 286739 | 288172 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| MEHKOANC_1 | 273926 | 274846 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MEHKOANC_1 | 4262200 | 4263576 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| MEHKOANC_1 | 2786702 | 2787554 | aadK | Streptomycin | 98.12 | 99.77 | M26879 |
| MEHKOANC_1 | 273926 | 274846 | mph(K) | Spiramycin, Telithromycin | 97.94 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEHKOANC_1 | 4262203 | 4263576 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| MEHKOANC_1 | 578340 | 579983 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| MEHKOANC_1 | 273926 | 274843 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| MEHKOANC_1 | 2786703 | 2787554 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| MEHKOANC_1 | 4259729 | 4260247 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| MEHKOANC_1 | 2072792 | 2075389 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.40 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MEHKOANC_1 | 2340587 | 2341228 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| MEHKOANC_1 | 3765782 | 3766963 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| MEHKOANC_1 | 3764157 | 3765299 | capA | 0.0 | Capsule | Immune modulation | 99.39 | 100.00 | NP_391469 |
| MEHKOANC_1 | 3347696 | 3348634 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| MEHKOANC_1 | 3765318 | 3765767 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| MEHKOANC_1 | 3351532 | 3352317 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391080 |
| MEHKOANC_1 | 3350310 | 3351506 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| MEHKOANC_1 | 2022712 | 2024475 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| MEHKOANC_1 | 3340540 | 3347676 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.05 | 100.00 | NP_391076 |
| MEHKOANC_1 | 3348662 | 3350281 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MEHKOANC_1 | 132400 | 133536 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MEHKOANC_1 | 18666 | 19535 | pdxS | 3.19e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MEHKOANC_1 | 1643211 | 1643987 | CodY | 3.48e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MEHKOANC_1 | 3604438 | 3605007 | ClpP | 8.73e-98 | part of proteolytic complex | 80.53 | 97.44 | BAB94595 |