Genome ID:GCA_023712285.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ODIOELCO_22501284502138aadKARO:3002627aadK97.89100.00AL009126.1
ODIOELCO_22473701474903bltARO:3003006blt98.50100.00L32599.1
ODIOELCO_44349951350871mphKARO:3004541mphK96.08100.00CP010314.1
ODIOELCO_44336655338088lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
ODIOELCO_22291637292806bmrARO:3003007bmr99.23100.00M33768.1
ODIOELCO_76263397265967Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
ODIOELCO_77143781144119ykkCARO:3003063ykkC98.21100.00AL009126.1
ODIOELCO_77143464143781ykkDARO:3003064ykkD98.10100.00AL009126.1
ODIOELCO_442856930197vmlRARO:3004476vmlR95.1999.09NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ODIOELCO_22501284502138aadKStreptomycin98.25100.00M26879
ODIOELCO_44349951350871mph(K)Spiramycin, Telithromycin96.31100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ODIOELCO_22501287502138aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
ODIOELCO_44349954350871mphKmacrolide 2'-phosphotransferase MphKBLASTX96.08100.00WP_003246254.1
ODIOELCO_442856930191vmlRABC-F type ribosomal protection protein VmlRBLASTX95.1998.90WP_003234144.1
ODIOELCO_114819248710satAstreptothricin N-acetyltransferase SatABLASTX91.33100.00WP_003242546.1
ODIOELCO_785443557032rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.94100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
ODIOELCO_11538495538944capC0.0CapsuleImmune modulation99.56100.00NP_391470
ODIOELCO_11537299538480capB0.0CapsuleImmune modulation99.49100.00NP_391471
ODIOELCO_11538963540105capA0.0CapsuleImmune modulation99.12100.00NP_391469
ODIOELCO_229224392884hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
ODIOELCO_11952706953491dhbA0.0BacillibactinNutritional/Metabolic factor98.86100.00NP_391080
ODIOELCO_11956389957327dhbB0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391077
ODIOELCO_11957347964483dhbF0.0BacillibactinNutritional/Metabolic factor98.44100.00NP_391076
ODIOELCO_11953517954713dhbC0.0BacillibactinNutritional/Metabolic factor98.25100.00NP_391079
ODIOELCO_78925511018dep/capD0.0CapsuleImmune modulation97.73100.00NP_389723
ODIOELCO_11954742956361dhbE0.0BacillibactinNutritional/Metabolic factor97.59100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ODIOELCO_12810226966tufA0.0elongation factor Tu84.9695.69AHM69299
ODIOELCO_443565225pdxS6.88e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
ODIOELCO_33322156321380CodY3.83e-125nutrient-responsive regulator81.08100.00ACJ80679
ODIOELCO_11692292691723ClpP6.41e-99part of proteolytic complex81.0597.44BAB94595
ODIOELCO_668611785725spxA12.29e-70redox-responsive transcription factor83.97100.00AAF21893
ODIOELCO_668611785725spx1.37e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
ODIOELCO_22060520847SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
ODIOELCO_447972779530CspA1.92e-31cold shock protein90.91100.00CAA62903
ODIOELCO_22104848105042CspD3.46e-28cold shock protein81.5498.48CAC99957
ODIOELCO_66328585328779CspB3.30e-27cold shock protein83.0898.48CAD00094