Genome ID:GCA_023713145.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1211717.72

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PJPJCEAH_8016327371633075ykkCARO:3003063ykkC100.00100.00AL009126.1
PJPJCEAH_8016324201632737ykkDARO:3003064ykkD99.05100.00AL009126.1
PJPJCEAH_80637080638249bmrARO:3003007bmr99.74100.00M33768.1
PJPJCEAH_80465136466338bltARO:3003006blt99.75100.00L32599.1
PJPJCEAH_80446306447160aadKARO:3002627aadK97.54100.00AL009126.1
PJPJCEAH_102415605417248vmlRARO:3004476vmlR98.35100.00NC_000964.3
PJPJCEAH_102111017112450lmrBARO:3002813lmrB99.37100.00JYFL01000006.1
PJPJCEAH_1029820199121mphKARO:3004541mphK97.71100.00CP010314.1
PJPJCEAH_1132741929989Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PJPJCEAH_913474636122tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034
PJPJCEAH_80446306447158aadKStreptomycin98.4899.77M26879
PJPJCEAH_1029820199121mph(K)Spiramycin, Telithromycin97.50100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PJPJCEAH_913474636119tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
PJPJCEAH_102415608417248vmlRABC-F type ribosomal protection protein VmlRBLASTX98.35100.00WP_003234144.1
PJPJCEAH_1029820199118mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
PJPJCEAH_80446306447157aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
PJPJCEAH_913812138639satAstreptothricin N-acetyltransferase SatABLASTX89.60100.00WP_003242546.1
PJPJCEAH_80939369941966rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.40100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PJPJCEAH_80836771837412hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
PJPJCEAH_91528305529486capB0.0CapsuleImmune modulation99.75100.00NP_391471
PJPJCEAH_91529969531111capA0.0CapsuleImmune modulation99.39100.00NP_391469
PJPJCEAH_91943216944001dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
PJPJCEAH_91946899947837dhbB0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391077
PJPJCEAH_91529501529950capC0.0CapsuleImmune modulation99.33100.00NP_391470
PJPJCEAH_91944027945223dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
PJPJCEAH_80986787988550dep/capD0.0CapsuleImmune modulation99.09100.00NP_389723
PJPJCEAH_91947857954993dhbF0.0BacillibactinNutritional/Metabolic factor99.09100.00NP_391076
PJPJCEAH_91945252946871dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078
PJPJCEAH_1531451gspG0.0GspEffector delivery system92.2699.34WP_004196811

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PJPJCEAH_1352813927003tufA0.0elongation factor Tu84.9695.69AHM69299
PJPJCEAH_1681129610427pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
PJPJCEAH_8013228361322060CodY1.67e-124nutrient-responsive regulator81.08100.00ACJ80679
PJPJCEAH_91690844690275ClpP6.36e-99part of proteolytic complex81.0597.44BAB94595
PJPJCEAH_8017852171784825spxA11.31e-69redox-responsive transcription factor83.97100.00AAF21893
PJPJCEAH_8017852171784825spx7.84e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
PJPJCEAH_1463475834516SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
PJPJCEAH_102364863365060CspA1.93e-31cold shock protein90.91100.00CAA62903