Genome ID:GCA_023714065.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 9 | 18.03 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CCBEJMBK_11 | 358592 | 358909 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| CCBEJMBK_11 | 358254 | 358592 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| CCBEJMBK_22 | 352099 | 353019 | mphK | ARO:3004541 | mphK | 97.06 | 100.00 | CP010314.1 |
| CCBEJMBK_22 | 338779 | 340218 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.42 | JYFL01000006.1 |
| CCBEJMBK_22 | 289093 | 289686 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| CCBEJMBK_64 | 277992 | 279161 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| CCBEJMBK_71 | 273147 | 275717 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| CCBEJMBK_64 | 95141 | 96343 | blt | ARO:3003006 | blt | 98.50 | 100.00 | L32599.1 |
| CCBEJMBK_64 | 77205 | 78059 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
| CCBEJMBK_22 | 31220 | 32863 | vmlR | ARO:3004476 | vmlR | 97.07 | 100.00 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CCBEJMBK_64 | 77205 | 78059 | aadK | Streptomycin | 98.95 | 100.00 | M26879 |
| CCBEJMBK_22 | 352099 | 353019 | mph(K) | Spiramycin, Telithromycin | 97.18 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CCBEJMBK_64 | 77205 | 78056 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| CCBEJMBK_22 | 31220 | 32860 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 97.07 | 100.00 | WP_003234144.1 |
| CCBEJMBK_22 | 352102 | 353019 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.06 | 100.00 | WP_003246254.1 |
| CCBEJMBK_6 | 14946 | 15464 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 94.80 | 100.00 | WP_003242546.1 |
| CCBEJMBK_53 | 58470 | 61067 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.71 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CCBEJMBK_1 | 35719 | 36900 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | NP_391471 |
| CCBEJMBK_53 | 160014 | 160655 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| CCBEJMBK_73 | 109176 | 110114 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| CCBEJMBK_53 | 8421 | 10184 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| CCBEJMBK_73 | 113012 | 113797 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391080 |
| CCBEJMBK_1 | 34094 | 35236 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| CCBEJMBK_1 | 35255 | 35704 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| CCBEJMBK_73 | 111790 | 112986 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| CCBEJMBK_73 | 102020 | 109156 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.32 | 100.00 | NP_391076 |
| CCBEJMBK_73 | 110142 | 111761 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.72 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CCBEJMBK_4 | 31766 | 32902 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| CCBEJMBK_12 | 11341 | 10472 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| CCBEJMBK_11 | 669246 | 670022 | CodY | 7.05e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| CCBEJMBK_72 | 139398 | 139967 | ClpP | 1.65e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| CCBEJMBK_11 | 199598 | 199990 | spxA1 | 4.84e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| CCBEJMBK_11 | 199598 | 199990 | spx | 2.89e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| CCBEJMBK_5 | 34760 | 34518 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| CCBEJMBK_22 | 88518 | 88321 | CspA | 1.92e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| CCBEJMBK_53 | 171884 | 172078 | CspD | 1.99e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| CCBEJMBK_8 | 32385 | 32191 | CspB | 3.46e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |