Genome ID：GCA_023714405.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	11	9	18.60

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PHDEBCGH_335	349949	350869	mphK	ARO:3004541	mphK	96.08	100.00	CP010314.1
PHDEBCGH_335	336653	338086	lmrB	ARO:3002813	lmrB	99.58	100.00	JYFL01000006.1
PHDEBCGH_335	286988	287581	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
PHDEBCGH_368	263394	265964	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.53	100.00	AL009126.3
PHDEBCGH_220	250191	251360	bmr	ARO:3003007	bmr	99.23	100.00	M33768.1
PHDEBCGH_220	87931	89133	blt	ARO:3003006	blt	98.75	100.00	L32599.1
PHDEBCGH_379	64256	64573	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
PHDEBCGH_379	63918	64256	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
PHDEBCGH_220	60696	61550	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1
PHDEBCGH_335	28569	30197	vmlR	ARO:3004476	vmlR	95.19	99.09	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PHDEBCGH_220	60696	61550	aadK	Streptomycin	98.25	100.00	M26879
PHDEBCGH_335	349949	350869	mph(K)	Spiramycin, Telithromycin	96.31	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PHDEBCGH_220	60696	61547	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
PHDEBCGH_335	349952	350869	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	96.08	100.00	WP_003246254.1
PHDEBCGH_335	28569	30191	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	95.19	98.90	WP_003234144.1
PHDEBCGH_313	480542	481060	satA	streptothricin N-acetyltransferase SatA	BLASTX	91.33	100.00	WP_003242546.1
PHDEBCGH_324	494953	497550	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.94	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PHDEBCGH_109	9516	9965	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
PHDEBCGH_109	8320	9501	capB	0.0	Capsule	Immune modulation	99.49	100.00	NP_391471
PHDEBCGH_109	9984	11126	capA	0.0	Capsule	Immune modulation	99.12	100.00	NP_391469
PHDEBCGH_220	450101	450742	hlyIII	0.0	Hemolysin III	Exotoxin	98.91	100.00	NP_390062
PHDEBCGH_109	459576	460361	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	98.86	100.00	NP_391080
PHDEBCGH_109	463259	464197	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.83	100.00	NP_391077
PHDEBCGH_109	464217	471353	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.44	100.00	NP_391076
PHDEBCGH_109	460387	461583	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.33	100.00	NP_391079
PHDEBCGH_262	1	377	flgB	0.0	Flagella	Motility	97.88	77.10	WP_011546417
PHDEBCGH_324	449773	451536	dep/capD	0.0	Capsule	Immune modulation	97.73	100.00	NP_389723
PHDEBCGH_109	461612	463231	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.59	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PHDEBCGH_11	31784	32920	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PHDEBCGH_53	4356	5225	pdxS	6.88e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.45	98.31	ACE61268
PHDEBCGH_324	150913	151689	CodY	4.07e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
PHDEBCGH_109	163312	162743	ClpP	3.45e-99	part of proteolytic complex	81.05	97.44	BAB94595
PHDEBCGH_357	273728	274120	spxA1	2.29e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
PHDEBCGH_357	273728	274120	spx	1.37e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
PHDEBCGH_22	20605	20847	SpoVG	7.51e-39	RNA-binding protein	81.48	79.41	AAT02994
PHDEBCGH_335	79727	79530	CspA	1.92e-31	cold shock protein	90.91	100.00	CAA62903
PHDEBCGH_220	438137	437943	CspD	3.34e-28	cold shock protein	81.54	98.48	CAC99957
PHDEBCGH_357	31260	31066	CspB	3.30e-27	cold shock protein	83.08	98.48	CAD00094