Genome ID:GCA_024125465.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
5025.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
JPFDEDJL_82398324468lnuAARO:3002835lnuA97.52100.00M14039.1
JPFDEDJL_81900020376tet(L)ARO:3000179tet(L)98.25100.00M11036.1
JPFDEDJL_81688118806tet(M)ARO:3000186tet(M)98.75100.31AB039845.1
JPFDEDJL_1753066715fexBARO:3007019fexB98.72100.00JN201336.1
JPFDEDJL_21541682poxtAARO:3004470poxtA99.08100.00MF095097.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
JPFDEDJL_21541682poxtAChloramphenicol, Florfenicol, Linezolid, Doxycycline, Tetracycline99.69100.00MF095097
JPFDEDJL_1753066715fexBChloramphenicol, Florfenicol99.57100.00JN201336
JPFDEDJL_81900120376tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.4999.93AY081910
JPFDEDJL_81688118806tet(M)Doxycycline, Tetracycline, Minocycline99.48100.00X75073
JPFDEDJL_82398324468lnu(A)Lincomycin98.56100.00M14039

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
JPFDEDJL_82398324465lnu(A)lincosamide nucleotidyltransferase Lnu(A)EXACTX100.00100.00WP_001829870.1
JPFDEDJL_81688118803tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.38100.00WP_000691727.1
JPFDEDJL_21571682poxtAABC-F type ribosomal protection protein PoxtABLASTX99.08100.00WP_002415638.1
JPFDEDJL_1753066712fexBchloramphenicol/florfenicol efflux MFS transporter FexBBLASTX98.72100.00WP_002415211.1
JPFDEDJL_81900020373tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_002294500.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
JPFDEDJL_612293022223WalR2.70e-116transcriptional regulatory protein85.59100.43EPH95667
JPFDEDJL_334780147998CspR2.13e-28cold shock protein81.82100.00AAO82613
JPFDEDJL_334780147995CspA1.04e-27cold shock protein81.5498.48CAA62903