Genome ID：GCA_024241215.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
11	10	7	16.43

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LGKKCICM_1	634965	635819	aadK	ARO:3002627	aadK	99.30	100.00	AL009126.1
LGKKCICM_1	605675	606877	blt	ARO:3003006	blt	99.25	100.00	L32599.1
LGKKCICM_3	427704	428021	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
LGKKCICM_3	427366	427704	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
LGKKCICM_4	409608	411245	vmlR	ARO:3004476	vmlR	98.72	99.63	NC_000964.3
LGKKCICM_1	376604	377773	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
LGKKCICM_5	257561	260131	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3
LGKKCICM_4	152233	152826	tmrB	ARO:3003059	tmrB	97.97	100.00	AL009126.3
LGKKCICM_4	101708	103147	lmrB	ARO:3002813	lmrB	98.95	100.42	JYFL01000006.1
LGKKCICM_4	88896	89816	mphK	ARO:3004541	mphK	97.06	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LGKKCICM_1	634965	635819	aadK	Streptomycin	99.18	100.00	M26879
LGKKCICM_4	88896	89816	mph(K)	Spiramycin, Telithromycin	96.96	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LGKKCICM_1	634968	635819	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	99.30	100.00	WP_003229862.1
LGKKCICM_4	409605	411245	vmlR	ABC-F type ribosomal protection protein VmlR	INTERNAL_STOP	98.54	99.82	WP_003234144.1
LGKKCICM_4	88896	89813	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.06	100.00	WP_003246254.1
LGKKCICM_1	70814	73411	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.94	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LGKKCICM_2	527641	528822	capB	0.0	Capsule	Immune modulation	99.83	100.00	NP_391471
LGKKCICM_2	937261	938046	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.75	100.00	NP_391080
LGKKCICM_1	177200	177841	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
LGKKCICM_2	528837	529286	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
LGKKCICM_2	529305	530447	capA	0.0	Capsule	Immune modulation	99.21	100.00	NP_391469
LGKKCICM_2	938072	939268	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.91	100.00	NP_391079
LGKKCICM_1	25031	26794	dep/capD	0.0	Capsule	Immune modulation	98.70	100.00	NP_389723
LGKKCICM_2	941902	949038	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.67	100.00	NP_391076
LGKKCICM_2	939297	940916	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.46	100.00	NP_391078
LGKKCICM_2	940944	941882	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.30	100.00	NP_391077

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LGKKCICM_6	31718	32854	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
LGKKCICM_8	4306	5175	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LGKKCICM_3	739598	740374	CodY	8.33e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LGKKCICM_2	685514	684945	ClpP	6.32e-99	part of proteolytic complex	81.05	97.44	BAB94595
LGKKCICM_3	275347	275739	spxA1	6.55e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LGKKCICM_3	275347	275739	spx	3.91e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LGKKCICM_7	20590	20832	SpoVG	7.51e-39	RNA-binding protein	81.48	79.41	AAT02994
LGKKCICM_4	355774	355971	CspA	1.90e-31	cold shock protein	90.91	100.00	CAA62903