Genome ID:GCA_024259785.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OLOPCOLM_6685118686287bmrARO:3003007bmr99.74100.00M33768.1
OLOPCOLM_7475661475978ykkDARO:3003064ykkD99.05100.00AL009126.1
OLOPCOLM_7475323475661ykkCARO:3003063ykkC100.00100.00AL009126.1
OLOPCOLM_6463823465025bltARO:3003006blt99.00100.00L32599.1
OLOPCOLM_6445417446271aadKARO:3002627aadK98.59100.00AL009126.1
OLOPCOLM_8345144346064mphKARO:3004541mphK97.39100.00CP010314.1
OLOPCOLM_8331812333251lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
OLOPCOLM_8282137282730tmrBARO:3003059tmrB97.46100.00AL009126.3
OLOPCOLM_82919730840vmlRARO:3004476vmlR98.35100.00NC_000964.3
OLOPCOLM_92747230042Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OLOPCOLM_6445417446271aadKStreptomycin98.71100.00M26879
OLOPCOLM_8345144346064mph(K)Spiramycin, Telithromycin97.39100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OLOPCOLM_6445417446268aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
OLOPCOLM_82919730837vmlRABC-F type ribosomal protection protein VmlRBLASTX98.35100.00WP_003234144.1
OLOPCOLM_8345147346064mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
OLOPCOLM_110258571026375satAstreptothricin N-acetyltransferase SatABLASTX93.64100.00WP_003242546.1
OLOPCOLM_6979202981799rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.65100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OLOPCOLM_1535645536826capB0.0CapsuleImmune modulation99.75100.00NP_391471
OLOPCOLM_1113002113787dhbA0.0BacillibactinNutritional/Metabolic factor99.75100.00NP_391080
OLOPCOLM_6882959883600hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
OLOPCOLM_1111780112976dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
OLOPCOLM_610342791036042dep/capD0.0CapsuleImmune modulation99.32100.00NP_389723
OLOPCOLM_1535181535630capC0.0CapsuleImmune modulation99.11100.00NP_391470
OLOPCOLM_1534020535162capA0.0CapsuleImmune modulation98.78100.00NP_391469
OLOPCOLM_1102010109146dhbF0.0BacillibactinNutritional/Metabolic factor98.74100.00NP_391076
OLOPCOLM_1109166110104dhbB0.0BacillibactinNutritional/Metabolic factor98.40100.00NP_391077
OLOPCOLM_1110132111751dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OLOPCOLM_113177832914tufA0.0elongation factor Tu84.9695.69AHM69299
OLOPCOLM_131133210463pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OLOPCOLM_7787077787853CodY6.74e-125nutrient-responsive regulator81.08100.00ACJ80679
OLOPCOLM_1376375376944ClpP6.40e-99part of proteolytic complex81.0597.44BAB94595
OLOPCOLM_7277636278028spxA15.30e-70redox-responsive transcription factor83.97100.00AAF21893
OLOPCOLM_7277636278028spx3.16e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OLOPCOLM_122062520867SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
OLOPCOLM_87925479057CspA1.89e-31cold shock protein90.91100.00CAA62903